| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_004302 | 32569 = | 3957 (6.740) | 359 (0.660) | 8/138 | 0.4 | 10.0% | coding (524/813 nt) | r1tp49 | N‑acetylmuramoyl‑L‑alanine amidase |
| ? | NC_004302 | 32599 = | 2770 (5.060) | coding (554/813 nt) | r1tp49 | N‑acetylmuramoyl‑L‑alanine amidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 3728 total aligned reads displayed.
CAAAGACCAACTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGACTTATCTTATTTTTGCAAAAGACA > NC_004302/32525‑32673 | agacagccAACTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACgatga > 1:13613885/7‑75 (MQ=255) atgcggcAACGCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACgatga‑t > 1:14907900/7‑75 (MQ=255) gacgaccaCTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑tt > 1:905522/8‑75 (MQ=255) ttatggtcTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTc > 1:380987/8‑75 (MQ=255) agtgcAACTCG‑C‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCa > 1:13032591/5‑75 (MQ=255) actggagtCGCC‑AAAGA‑‑CT‑TAGCAAAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTc > 1:13953271/8‑75 (MQ=255) acggggcTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCa > 1:1643195/7‑75 (MQ=255) tgacgttCGCCAAAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCa > 1:6824492/7‑75 (MQ=255) agaaaCTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCaa > 1:6969942/4‑75 (MQ=255) aataattgCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAac > 1:10128006/8‑75 (MQ=255) tctatCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacc > 1:637281/5‑74 (MQ=255) gtacacGCC‑AAAGA‑‑CT‑TAGC‑AAAAGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAaca > 1:967606/6‑75 (MQ=255) tcggtataaaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacaca > 1:10681216/8‑75 (MQ=255) tacaaagaaaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacaca > 1:14751834/8‑75 (MQ=255) ctagCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacacac > 1:8740013/4‑75 (MQ=255) tCGCC‑AAAGAATCT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacaca > 1:16066664/1‑75 (MQ=255) tCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacactcg > 1:15416858/1‑72 (MQ=255) cgaacgtaaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacacac > 1:7790689/8‑75 (MQ=255) atatcagaaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacacac > 1:4994680/8‑75 (MQ=255) atatcagaaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacacac > 1:12059738/8‑75 (MQ=255) aaccctaaaGAC‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAacaca > 1:6056534/7‑75 (MQ=255) gctctata‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCAACG‑AAA‑TCTAATC‑AAACT‑AATAACGATGA‑TTCAACACACGCa > 1:17084517/8‑75 (MQ=255) gtgaaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCaa > 1:15252859/4‑75 (MQ=255) ctccatgttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatgA‑TTGAac < 1:13782453‑M2/7‑1 (MQ=255) aggaGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAAt > 1:622088/4‑75 (MQ=255) tccatgttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatga‑tctatcg < 1:12886611‑M2/8‑7 (MQ=255) ccgaa‑‑CT‑TTGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATc > 1:16739522/5‑75 (MQ=255) acgacagcT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCaa > 1:7296581/8‑75 (MQ=255) ccatgctaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatca‑ttgcgagt < 1:4857972‑M2/9‑7 (MQ=255) attaactt‑tAGCAAAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACA‑GCAAt > 1:8894515/8‑75 (MQ=255) aaGA‑‑CTATAGA‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATc > 1:2323084/1‑75 (MQ=255) agaagtt‑tAGA‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATc > 1:5549504/7‑75 (MQ=255) atgttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgata‑ttcagtgactt < 1:922518‑M2/12‑8 (MQ=255) atgttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgata‑ttcaccaaaag < 1:6696413‑M2/12‑8 (MQ=255) atgttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgata‑ttcacacaagt < 1:9523668‑M2/12‑8 (MQ=255) gttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatga‑tccaatagaatg < 1:8607680‑M2/13‑8 (MQ=255) cgggaaaGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCa‑a > 1:3942510/7‑75 (MQ=255) ttaggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatga‑ttcaactccgtta < 1:13162525‑M2/14‑8 (MQ=255) tgagatc‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACt > 1:2166903/7‑75 (MQ=255) attaataaaaCGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACt > 1:11576031/8‑75 (MQ=255) atatac‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTa > 1:13477281/6‑75 (MQ=255) aggtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatgatttcaacattcttct < 1:3519917‑M2/16‑8 (MQ=255) aaaGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑Accat > 1:3684823/3‑72 (MQ=255) gtgtgtagttgattgcgtgtgttgaatcatcgttattagattgattagatttcgatga‑ttcaactcacacccgct < 1:8462424‑M2/18‑8 (MQ=255) atcatgaCGGTATTGGTGGG‑GCATCGAAAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTac > 1:7425877/7‑75 (MQ=255) ccaaaaCGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac > 1:1194014/4‑75 (MQ=255) agaaaaCGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac > 1:1274715/4‑75 (MQ=255) tatgtcGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑a > 1:16622447/6‑75 (MQ=255) agtcacagTATT‑GTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac > 1:5173011/8‑75 (MQ=255) ttagtggTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCACACTacac‑a > 1:15607108/6‑75 (MQ=255) tgacgggTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac > 1:4428444/6‑75 (MQ=255) tagtgtatATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac > 1:14205240/8‑75 (MQ=255) gaaaCGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac > 1:9364529/2‑75 (MQ=255) aaaaCGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac > 1:5852139/2‑75 (MQ=255) ggattgctggtgttgaaaCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac < 1:4665151‑M1/57‑1 (MQ=255) agtgggTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑agc > 1:11783328/5‑73 (MQ=255) catgtcgtatgttgaatCATCG‑AAAATCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTacac‑ac < 1:247833‑M1/58‑1 (MQ=255) atctagtggtggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACGTCAC‑ACCTag > 1:10543227/7‑74 (MQ=255) atccgattgttgaatCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTa < 1:8161176‑M1/60‑1 (MQ=255) ttttttGGTGTG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAAc > 1:4104744/5‑75 (MQ=255) tttATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAAc > 1:14565789/3‑75 (MQ=255) cgttactgtggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACACTACCTaa > 1:11294379/8‑75 (MQ=255) atgagtggtggC‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACCACAC‑ACCTaca > 1:11017618/6‑73 (MQ=255) ttcgagttggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACa > 1:2858201/8‑75 (MQ=255) ttATTGGTGGA‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACa > 1:7973300/2‑75 (MQ=255) gttagcttggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACa > 1:7578695/8‑75 (MQ=255) cttaaggtggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAAct > 1:12230938/6‑74 (MQ=255) cgcacggtgcG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACa > 1:10011372/6‑75 (MQ=255) tATTGTTGGA‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACAt > 1:12623370/1‑75 (MQ=255) gtcgatttgaacCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACa < 1:16269403‑M1/63‑1 (MQ=255) ggtgtgttgactCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACa < 1:10858246‑M1/63‑1 (MQ=255) gatagtgggg‑gTATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACAt > 1:17692577/8‑75 (MQ=255) cttagatggG‑GTATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACag > 1:8287271/7‑74 (MQ=255) agaatgtggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACAt > 1:2699516/6‑75 (MQ=255) ttgataggg‑gAATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATg > 1:15031084/7‑75 (MQ=255) tggtgtggG‑TCATCG‑AAA‑TCTAATCAAATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACAt > 1:6558549/5‑75 (MQ=255) cttGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATg > 1:10362717/2‑75 (MQ=255) caatgtggG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATg > 1:1575971/5‑75 (MQ=255) aggtgttgtatCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACAt < 1:2032708‑M1/64‑1 (MQ=255) ttGGTGGGTGCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑Accgtacatg > 1:3300330/1‑68 (MQ=255) tgggttggatCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATg < 1:14079555‑M1/65‑1 (MQ=255) tctttggG‑ACATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATgg > 1:17213499/5‑75 (MQ=255) ccggtgaataCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATg < 1:4551172‑M1/65‑1 (MQ=255) attgggtg‑gCATCA‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTACCATgg > 1:5366659/8‑75 (MQ=255) ggggtgaatGATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATgg < 1:11409974‑M1/66‑1 (MQ=255) caattaatTATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATgga < 1:15942473‑M1/67‑1 (MQ=255) tagtaATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGaa < 1:1802685‑M1/70‑1 (MQ=255) cgtgCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACAGggaaaaa > 1:5721149/4‑71 (MQ=255) tttTCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGaaaaa < 1:11137736‑M1/72‑1 (MQ=255) aaatgtaaa‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGaaaaa > 1:983562/7‑75 (MQ=255) ttgaattatc‑aatcT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATg > 1:7124806/8‑75 (MQ=255) tgatacaatc‑aatcTAAATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAAt > 1:4243465/7‑75 (MQ=255) gcttgggt‑aatgaCGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGActtatc > 1:2986757/8‑75 (MQ=255) taccaataaCGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGActcatcttat > 1:17543479/5‑75 (MQ=255) gcgaataaCGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAATGAAATGACTTATCTTAtt > 1:16928866/4‑75 (MQ=255) tgacttccgatgA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGACTTATCTTAttt > 1:3140782‑M2/13‑75 (MQ=255) ttaattagatgA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGACTTATCTTAtttt > 1:12452157‑M2/12‑75 (MQ=255) agggtgggatgA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGACTTATCTTAtttt > 1:14416328‑M2/12‑75 (MQ=255) caaaataatgA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACACGGAGGAAAAAGAAATGACTTATCTTAttttt > 1:17416151‑M2/11‑75 (MQ=255) catcgattgA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGACTTATCTTATTTTTg > 1:1334612‑M2/10‑75 (MQ=255) | CAAAGACCAACTCGCC‑AAAGA‑‑CT‑TAGC‑AAACGGTATTGGTGGG‑GCATCG‑AAA‑TCTAATC‑AATCT‑AATAACGATGA‑TTCAACACACGCAATCA‑ACTACAC‑ACCTAACATGGAGGAAAAAGAAATGACTTATCTTATTTTTGCAAAAGACA > NC_004302/32525‑32673 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |