| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_004302 | = 23379 | 27 (0.050) | 475 (0.810) | 19/148 | 0.2 | 91.4% | coding (537/642 nt) | r1tp40 | ORF40 |
| ? | NC_004302 | 24308 = | 62 (0.110) | intergenic (+198/‑21) | r1tp41/r1tp42 | ORF41/ORF42 | |||||
Only 100 of 475 total aligned reads displayed.
TGGTGATATTCAAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_004302/23307‑23379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGATA > NC_004302/24308‑24380 taTGATATTCAAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGACAC‑TGG‑‑G‑TTAg > 1:15359347/3‑74 agagTTCAAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGT > 1:5109589/5‑75 GATATTCAAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGT > 1:17580571/1‑75 tgtggatAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTG > 1:4513128/8‑75 gttttatAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTG > 1:2590699/8‑75 aacgagAAAATGGCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGT > 1:14905709/7‑75 gcgtaatAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGG > 1:15043531/8‑75 aaagtgtAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGG > 1:12204480/8‑75 taaAAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATGACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTA > 1:14646672/4‑75 gtgtgggAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAA > 1:3497690/8‑75 tataAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑T‑TTA‑TGGTGGTACGAAAGAAGAA > 1:10598124/5‑75 aggaatGTTTT‑TCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAA > 1:12607492/7‑75 gttttacTTT‑GGGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAAT > 1:7491499/8‑75 aggtaGTTTTGGCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAA > 1:7633111/6‑75 ttagtTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATG > 1:1164863/6‑75 agAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATG > 1:994451/3‑75 tgGGTTTT‑G‑GAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCt > 1:10693066/3‑74 gcgggtaT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGC > 1:16437887/8‑75 cttTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACTAAACAAGAAATcca > 1:2033975/4‑72 atgtgaT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCA > 1:4906530/7‑75 agcagTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCA > 1:3181373/6‑75 gtaggT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAA > 1:3309330/6‑75 gtacctaGAAACAAAACTACACAAATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAA > 1:10961239/8‑75 tataggAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGAC > 1:6838784/7‑75 ctcgggtACAAGACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGAC > 1:9012655/8‑75 tttaAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACT > 1:10360963/5‑75 gtggccACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACT > 1:1911399/7‑75 cGCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACT > 1:9577038/2‑75 aaaGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACT > 1:13240890/4‑75 gggtgACAATACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTC > 1:7788784/6‑75 aagtAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTC > 1:11014656/5‑75 cgagaAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTT > 1:10316299/6‑75 aatttAAAATTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTT > 1:14195773/6‑75 gcagtAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTG > 1:6303066/6‑75 gaggtatACTATAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTG > 1:6761566/8‑75 tgctagACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGA > 1:437073/7‑75 ttgagACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGAC > 1:13748159/6‑75 gaatCTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTG > 1:7594225/5‑75 agtACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTG > 1:15108383/4‑75 ctcaTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGGAAGAAGAAATGCAACGACCCTTGACTGA > 1:3004165/5‑75 aggagtCAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGA > 1:5638917/7‑75 tcccagAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGAg > 1:5319954/7‑74 taccgAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATG > 1:17144024/6‑75 attgagtAATGCTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATG > 1:8834785/8‑75 tttgaTTGAT‑ACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAG > 1:9240861/6‑75 tatggTTGAT‑ACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAG > 1:10170439/6‑75 gactcaTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAg > 1:7323631/7‑74 ccaacgGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAG > 1:3742360/7‑75 taagtatTAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGC > 1:10920410/8‑75 cttacacAANTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCT > 1:16842465/8‑75 caTTGATAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCT > 1:11377950/3‑75 agaaaagAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCT > 1:4112725/8‑75 aaatgggAACTTGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCT > 1:15679756/8‑75 ggtggtgGAAACTTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACT > 1:7040186/8‑75 gcccaGAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGc > 1:11523052/6‑74 gttttAAAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTC > 1:16113935/6‑75 atccGAAAG‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTC > 1:15986643/5‑75 actgaAAAC‑TCG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTC > 1:808632/6‑75 tgattcC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:14303917/7‑75 tagagAC‑TGC‑‑G‑TTA‑TGATGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:15534865/6‑75 gtaacAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTCGTCAA > 1:13186367/6‑75 ggatttC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:2804242/7‑75 gcGAAAC‑TGGGTG‑TTA‑TGGTGGAACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTC > 1:17676727/3‑75 gatgggC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAAAGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:9300388/7‑75 tttagttTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:8591950/8‑75 ttgtgtgTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:4592/8‑75 tggtaaaTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:8950062/8‑75 tggcactTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:3986488/8‑75 gggcaggTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:4206476/8‑75 gaggcggTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:7181266/8‑75 cgtatttTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:1740234/8‑75 agtgaagTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:2166282/8‑75 aatttctTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:17515859/8‑75 aatcgagTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:1670811/8‑75 aaataaaTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAA > 1:12808844/8‑75 gctaggTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTTAAAAGCTGACTGGTCAAA > 1:6227352/7‑75 atgttgTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAA > 1:1808142/7‑75 agAAC‑TGG‑‑GTTTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAA > 1:16288191/3‑75 aaacttTGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAA > 1:13974970/7‑75 ctttgaGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAA > 1:5504312/7‑75 ctAC‑TGG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAG > 1:12316091/3‑75 atgattaG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATCCTCAAAAGCTGACTGGTCAAAA > 1:8718037/8‑75 atgaagaG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAA > 1:17308391/8‑75 gcaataG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAG > 1:10009926/7‑75 attcctG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAG > 1:2462499/7‑75 gttaaG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGT > 1:582837/6‑75 gaatcG‑‑G‑TTATTGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAG > 1:5962226/6‑75 tggggaG‑TTA‑TGGGGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGT > 1:11297142/7‑75 ggtG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTAT > 1:4691767/4‑75 atgtatG‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGT > 1:13426338/7‑75 taG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATG > 1:10841094/3‑75 aaatagtTTA‑TGGTGCTACGAAAGAAGAAATGCAACGACTCTTGACTGAAGCTCAAAAGCTGACAGGTCAAAAGT > 1:11813873/8‑75 tG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGA > 1:7978521/2‑75 ggcattTTA‑TGGTGGTACGAAAGAAGAAATGAAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTA > 1:6163462/7‑75 GG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGA > 1:8281961/1‑75 GG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGA > 1:8219139/1‑75 GG‑‑G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGA > 1:11143149/1‑75 taG‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGA > 1:15206886/3‑75 gtG‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGA > 1:4787231/3‑75 G‑TTA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGATA > 1:15827583/1‑75 TGGTGATATTCAAAAT‑GCTTATCAAGGTTTT‑GCGAAACAAAACTACAC‑AATGCTTGATAACTTGAAAC‑TGG‑‑G‑T‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_004302/23307‑23379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TA‑TGGTGGTACGAAAGAAGAAATGCAACGACTCTTGACTGATGCTCAAAAGCTGACTGGTCAAAAGTATGATA > NC_004302/24308‑24380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |