| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_004302 | 8,712 | (TGAATT)3→2 | coding (21‑26/396 nt) | r1tp14 → | ORF14 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_004302 | 8696 | 8701 | 6 | 117 [0] | [0] 114 | r1tp13 r1tp14 |
ORF13 ORF14 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_004302 | 8702 = | 0 (0.000) | 97 (1.740) | 5/116 | 0.2 | 100% | coding (165/165 nt) coding (11/396 nt) |
r1tp13 r1tp14 |
ORF13 ORF14 |
| ? | NC_004302 | = 8695 | 0 (0.000) | coding (158/165 nt) coding (4/396 nt) |
r1tp13 r1tp14 |
ORF13 ORF14 |
|||||
Only 100 of 128 total aligned reads displayed.
TCATAGAATTGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_004302/8786‑8702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattca‑aattcaaa‑ttTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATCTCATGATC < NC_004302/8695‑8622 CATAGAATTGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑A < 1:790026/75‑1 ctGAATTGAAGTTTACCCTTCACTTTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATgacac < 1:2464403/73‑6 TAGAATTGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAAccaaaca < 1:13064966/75‑8 GAATTGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCCATTataaccc < 1:901045/75‑8 AATTGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCA < 1:12056604/75‑1 TGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCC‑AATattgcc < 1:7150103/75‑7 TGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCC‑AATTCAcat < 1:5421722/75‑4 GAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCC‑AATggacaag < 1:11464202/75‑8 AAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATT‑A‑AATTCAAAagcc < 1:10362687/75‑5 TACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACac < 1:12767443/75‑3 ACCCTTCAC‑‑TTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCtc < 1:3769158/75‑3 CCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACatta < 1:6382196/75‑5 CCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑ATTC‑Atggca < 1:14263958/75‑6 gCTTCAT‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TCTC‑Aaactcc < 1:3440864/74‑7 CCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAC‑TTTC‑Agtccgt < 1:10896509/75‑7 CCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TCTC‑Atgtatt < 1:3728548/75‑7 CTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑Aaaaaata < 1:3832231/75‑8 TCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCatacct < 1:8845869/75‑7 CAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCtaaaaac < 1:7462869/75‑8 CAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCcccatta < 1:15045412/75‑8 CAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCccatcca < 1:4876838/75‑8 CAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTT‑‑ACT‑G‑‑CTTCTCtt < 1:1778477/75‑3 AC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTatttc < 1:3605824/75‑6 C‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑TTTCTCaa < 1:7261124/75‑3 C‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCtc < 1:12350011/75‑3 TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTaactagt < 1:10960261/75‑8 TTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCATTTTTATCCAATTCA‑AATTCAAA‑TTTCAACTCG‑‑Ccctaact < 1:10125610/75‑8 TTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCGACCTTCTCCA < 1:1506867/75‑1 TTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAcat < 1:9926583/75‑4 TTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAtcct < 1:10669220/75‑5 TTAATGCCTTTTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑TTTCTacccat < 1:13302526/75‑7 atctgtC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCAAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TA > 1:3605209/7‑75 AATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑Tcg < 1:11593838/75‑3 ATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAATTTTC‑ACTCG‑‑CTTCCCCAAgcattg < 1:12784898/75‑7 ATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑Acaccat < 1:8100980/75‑7 ATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCAAA‑ATatctc < 1:7563525/75‑6 ctC‑‑TTTTTGCGGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAATATC‑TAACt < 1:13721943/73‑2 C‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATT‑TAACAtcg < 1:16905833/75‑4 TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAcgactac < 1:11017448/75‑8 TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAAgagaaa < 1:12712043/75‑7 TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAcctc < 1:11610239/75‑5 TTTTTGCTGCTGAGTAGTTGGCA‑ATTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAAgagaaa < 1:12732534/75‑7 tcTTGCTGCTATGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGC < 1:14503229/73‑1 TTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAAcaat < 1:6737950/75‑5 ttaGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTtcc < 1:16547906/72‑4 cTTGCTGCTGTGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TCACAAatagc < 1:6832584/74‑6 TTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TTACAAcgcct < 1:2655379/75‑6 TTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATCATAACAccagac < 1:1884039/75‑7 atCTGCCGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTtaaat < 1:3611460/73‑6 TGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAATAATTttact < 1:10980485/75‑6 GCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTtaccaa < 1:16253598/75‑7 CTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACATTTGCAGtag < 1:2336678/75‑4 CTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGccg < 1:3398709/75‑4 TGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGattttta < 1:8261848/75‑8 TGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAtaatc < 1:2043679/75‑6 GCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGactta < 1:12880951/75‑6 GCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGaatca < 1:6984612/75‑6 accaggGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCAACTG > 1:11922702/7‑75 accaggGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCAACTG > 1:14010002/7‑75 accaggGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCAACTG > 1:14029950/7‑75 TGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTG < 1:2523183/75‑1 TGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTG < 1:4304052/75‑1 GAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATgaac < 1:5812048/75‑5 AGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATttgta < 1:6645878/75‑6 GTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATgtttac < 1:9875109/75‑7 GTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATgtttac < 1:14752962/75‑7 GTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATgttgca < 1:13510436/75‑7 GTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAtc < 1:7946913/75‑3 TAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTcaata < 1:11876428/75‑6 AGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCCTCTcgcttc < 1:14488082/75‑7 AGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCacctcga < 1:11970231/75‑8 AGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGcccaa < 1:12905338/75‑6 AGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGActtc < 1:4844094/75‑5 TTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCcca < 1:13124907/75‑4 GCA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCgctgcaa < 1:12097056/75‑8 CA‑TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCGTCTGAGCCAccctaa < 1:9984932/75‑7 TTTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATagcgtaa < 1:5112602/75‑8 TTTATCCAATTCA‑AATTCAAATTTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGgccg < 1:10729400/75‑5 TTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGtttactt < 1:7388847/75‑8 TTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGtagtcca < 1:6633790/75‑8 TTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATact < 1:13404608/75‑4 TTTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAG‑CATGCGtcgaaa < 1:2214142/75‑7 TTATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGgatata < 1:5505960/75‑7 TATCCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATctatt < 1:2996543/75‑6 CCAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGTTTAgatgat < 1:12709925/75‑7 CAATTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGActtc < 1:10078206/75‑5 AATTCACAATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAtacagtt < 1:5522270/75‑8 TTCA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATActgt < 1:2469299/75‑5 CA‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAA‑AATAAAtaatc < 1:11312329/75‑6 A‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGACTAAgcccta < 1:12815919/75‑7 A‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGACTAAgcccta < 1:16897356/75‑7 A‑AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAccactct < 1:8880959/75‑8 AATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAtg < 1:1829382/75‑3 ATTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAttacatt < 1:14979685/75‑8 TTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAAataaga < 1:10169185/75‑7 TTCAAA‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATCT < 1:1072540/75‑1 A‑TTTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATtataagt < 1:12850289/75‑8 TTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATCTgacttat < 1:15672065/75‑8 TTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATCTCctatta < 1:1210008/75‑7 TTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATCTCAaccta < 1:1744131/75‑6 TCATAGAATTGAAGTTTACCCTTCAC‑TTTTTTAATGCC‑‑TTTTTGCTGCTGAGTAGTTGGCA‑TTTTATCCAATTCA‑AATTCAAA‑TT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_004302/8786‑8702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aattca‑aattcaaa‑ttTC‑ACTCG‑‑CTTCTCCAA‑ATC‑TAACAATTGCAGGCATCTGAGCCATGCGATTAAGAATAAAAATAATCTCATGATC < NC_004302/8695‑8622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |