New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 1038626 =77 (0.860)4 (0.050) 4/444 8.2 4.6% intergenic (‑35492/+14309) unknown/unknown tRNA‑Lys‑TTT/tRNA‑Lys‑TTT
?1 1039069 = 90 (1.030)intergenic (‑35935/+13866) unknown/unknown tRNA‑Lys‑TTT/tRNA‑Lys‑TTT
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTCAATACTGTCATCAAACTCATTAAAAAAGCACAATCCGTCATCATTGCAACCGATATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/1038875‑1038626
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggctcCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT  >  1/1039069‑1039318
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GTTCAATACTGTCATCAAACTCATTAAAAAAGAACAATCCGTCATAATTGCAACCGATATTGTTCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACTTTACCGTTATATTATGCCGGATTAGGGCGTAGCCGGGCGGGTTGGCTaa                                                                                                                                                                                                                                                           >  1:829614/1‑249
                                         TCATCATTGCAACCGATATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTC‑‑‑‑‑A‑‑TTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGAT                                                                                                                                                                                                            <  1:548616/250‑1
                                                          ATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATT                                                                                                                                                                                                 >  1:127830/1‑251
                                                                                                                                                                       AAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGC                                                                                    <  1:200127/251‑1
                                                                                                                                                                                                     AAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCG                                                       <  1:256689/250‑1
                                                                                                                                                                                                                                                      GCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATA     >  1:604758/1‑251
                                                                                                                                                                                                                                                      GCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTG                                                                              >  1:383723/1‑178
                                                                                                                                                                                                                                                        TCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAAT   <  1:609495/251‑1
                                                                                                                                                                                                                                                         CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT  >  1:288899/1‑251
                                                                                                                                                                                                                                                         CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT  >  1:401560/1‑251
                                                                                                                                                                                                                                                         CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT  >  1:556922/1‑251
                                                                                                                                                                                                                                                         CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGT                                                                           >  1:277464/1‑178
                                                                                                                                                                                                                                                         CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATAC                                                                                               >  1:16012/1‑158
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
GTTCAATACTGTCATCAAACTCATTAAAAAAGCACAATCCGTCATCATTGCAACCGATATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/1038875‑1038626
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggctcCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT  >  1/1039069‑1039318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.