| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1038626 = | 77 (0.860) | 4 (0.050) | 4/444 | 8.2 | 4.6% | intergenic (‑35492/+14309) | unknown/unknown | tRNA‑Lys‑TTT/tRNA‑Lys‑TTT |
| ? | 1 | 1039069 = | 90 (1.030) | intergenic (‑35935/+13866) | unknown/unknown | tRNA‑Lys‑TTT/tRNA‑Lys‑TTT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTCAATACTGTCATCAAACTCATTAAAAAAGCACAATCCGTCATCATTGCAACCGATATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1038875‑1038626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggctcCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT > 1/1039069‑1039318 GTTCAATACTGTCATCAAACTCATTAAAAAAGAACAATCCGTCATAATTGCAACCGATATTGTTCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACTTTACCGTTATATTATGCCGGATTAGGGCGTAGCCGGGCGGGTTGGCTaa > 1:829614/1‑249 TCATCATTGCAACCGATATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTC‑‑‑‑‑A‑‑TTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGAT < 1:548616/250‑1 ATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATT > 1:127830/1‑251 AAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGC < 1:200127/251‑1 AAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCG < 1:256689/250‑1 GCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATA > 1:604758/1‑251 GCTCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTG > 1:383723/1‑178 TCCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAAT < 1:609495/251‑1 CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT > 1:288899/1‑251 CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT > 1:401560/1‑251 CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT > 1:556922/1‑251 CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGT > 1:277464/1‑178 CCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATAC > 1:16012/1‑158 GTTCAATACTGTCATCAAACTCATTAAAAAAGCACAATCCGTCATCATTGCAACCGATATTGATCGTGAAGGTGAAACCATCGCCCGGGAATTATTAGAGTTAGCCGGATTTAAAGGCGGGATCCAGCGCCTCTGGTTATCGGCATTGGATGATGTCAGTATTCGTAAAGCCTTAGCCTTATTGAAACCTAATCATGAAACCTTACCGTTATATTATGCCGGATTAGGGCGTAGTCGGGCGGATTGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1038875‑1038626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggctcCTAATACTTTGGCAATGTCATTTCCCTGAGAAGGTTTTTCACAAAGATAGAGTTTCATTTTTTACCTCGCTTAAACGCATTCCAGAGAATTCAGCCAATCCGGACAAACACTAATTCGGATAAACTGCATATTAAGATCCCAGCCATAGTTATATACATTCATAGAGCTTATTGTGTTGCCAGGTAAGGTAAATTCGGGTTTCTCCTTAAATCCATATACCTCACCTGTCGGTTGTGTCGCAATATAATT > 1/1039069‑1039318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |