| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1166874 | 127 (1.120) | 3 (0.030) | 3/402 | 8.8 | 2.6% | intergenic (+27744/+226437) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| ? | 1 | = 1166924 | 112 (1.100) | intergenic (+27794/+226387) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAGCTGAAATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1166606‑1166874‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggttcctgagcttgtcgaagAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA < 1/1166924‑1166681 AAGCTGAAATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGG < 1:512076/251‑1AAGCTGAAATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGG < 1:678456/251‑1 GCTGAAATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTT > 1:400763/1‑251 TGAAATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCC < 1:557921/251‑1 ATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAG < 1:659627/251‑1 TGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGC < 1:423905/251‑1 GGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTAC > 1:682148/1‑239 ATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGT > 1:556037/1‑251 ATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGT > 1:849479/1‑251 GCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCC < 1:99996/250‑1 TTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGA < 1:61197/190‑1 CCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAG < 1:809372/169‑1 ACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTG > 1:779125/1‑251 ACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGG < 1:892040/83‑1 ATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAA > 1:876545/1‑243 GTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCA > 1:945949/1‑250 GTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCA > 1:366545/1‑250 GTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCA > 1:832948/1‑250 GTTCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCA > 1:833889/1‑250 TCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACG > 1:286121/1‑250 TCCTGAGCTTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACG > 1:111481/1‑250 TTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAA < 1:636426/251‑1 TTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAA < 1:908659/251‑1 TTGTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAA < 1:934638/251‑1 TTGTCGAAAAAATAGTTCGAAG‑ATGAGTTTTGTTGCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAA < 1:857016/251‑1 GTCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA > 1:690844/1‑251 TCGAAGAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACTCGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA < 1:571007/250‑1 GAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCC > 1:733131/1‑181 AAGCTGAAATGGAATCTTTCACCAAAGAAGTGATTTCACGTTAAGGGGAGCGAATCTTATTAAAATATCGGCACGTTTTTCTAAGGCGTGCCTTTCATCCAAAAAGTGCGGTCACAAAAAACGACGTTTTTTTAACGTTGGCTTTGCCAACGGCCCCGTTAGGGGTGAACAAACGAGAGATCGAGTTTGTGAATAATTTTCCCACGTGTTTTTCACTATTGTGTAGCTGTTGCACAAAGATGAAATTACGGTTCCTGAGCTTGTCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1166606‑1166874‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggttcctgagcttgtcgaagAATTAG‑TCGAAGCATGAGTTTTGTGCCTAAATAGGATGAAATTACTCATCCTTCGACAAGCTCAGGAACCGTAATTTCATCTTTGTGCAACAGCTACACAATAGTGAAAAACACGTGGGAAAATTATTCACAAACTCGATCTCTCGTTTGTTCACCCCTAACGGGGCCGTTGGCAAAGCCAACGTTAAAAAAACGTCGTTTTTTGTGACCGCACTTTTTGGATGAAAGGCACGCCTTAGAAAAA < 1/1166924‑1166681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |