Predicted mutation
evidence seq id position mutation annotation gene description
MC JC 1 1,010,171 Δ377 bp intergenic (‑3715/‑24672) unknown ← / → unknown tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ 1 1010171 1010547 377 68 [0] [0] 68 unknown/unknown tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 10101700 (0.000)67 (0.770) 55/426 0.3 100% intergenic (‑3714/‑25049) unknown/unknown tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
?1 1010548 = 0 (0.000)intergenic (‑4092/‑24671) unknown/unknown tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA

GTCTTTTTTTGCTTATTAGGAAAAAGAAGTGTTTTTGGGCTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTATTCCTAAAAACAGCCCAAAGAAACGATTAACCTTAGATGAACGTTTGCAAAATGAAAACTATCAGATTTTAAATGATTGGGACAATTTTCCTATTGCCGGTGAGGAGTTAATTTAATGTATATTCCTGAACGTGGCGATATTGTAAGAATTTGTTTAAATCCGGTTGTTGGTAATGAAATTCAGGGGGAACAACGACTGGTTTTAGTCATTAGCCCCAAACGTTTTAATCAATATGGATTAATTTTAGT  >  1/1009925‑1010419
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                         
gTCTTTTTTTGCTTATTAGGAAAAAGAAGTGTTTTTGGACTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcg                                                                                                                                                                                                                                                       <  1:97347‑M1/250‑5 (MQ=255)
 tCTTTTTTTGCTTATTAGGAAAAAGAAGTGTTTTTGGACTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgag                                                                                                                                                                                                                                                     <  1:604822‑M1/251‑7 (MQ=255)
           cTTATTAGGAAAAAGAAGTGTTTTTGGACTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaa                                                                                                                                                                                                                                           <  1:860166‑M1/251‑17 (MQ=255)
                          aagTGTTTTTGGACTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcac                                                                                                                                                                                                                             <  1:549361‑M1/250‑31 (MQ=255)
                          aagTGTTTTTGGACTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcac                                                                                                                                                                                                                             <  1:787599‑M1/250‑31 (MQ=255)
                                       cTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtg                                                                                                                                                                                                               <  1:214518‑M1/251‑45 (MQ=255)
                                         gTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgca                                                                                                                                                                                                             >  1:327894‑M1/1‑205 (MQ=255)
                                         gTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgca                                                                                                                                                                                                             >  1:589197‑M1/1‑205 (MQ=255)
                                                                ggCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacag                                                                                                                                                                                      >  1:595279‑M1/1‑182 (MQ=255)
                                                                ggCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatc                                                                                                                                                                                          <  1:272322‑M1/247‑66 (MQ=255)
                                                                ggCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaa                                                                                                                                                                                                                                           >  1:96504‑M1/1‑182 (MQ=255)
                                                                 gCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGCGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacag                                                                                                                                                                                      >  1:547372‑M1/1‑181 (MQ=255)
                                                                                 aaaTGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattga                                                                                                                                                                     >  1:92083‑M1/1‑165 (MQ=255)
                                                                                   aTGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagg                                                                                                                                                                   >  1:656391‑M1/1‑163 (MQ=255)
                                                                                        aCGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaa                                                                                                                                                              >  1:63707‑M1/1‑158 (MQ=255)
                                                                                              aggtgaggtAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataat                                                                                                                                                        >  1:751021‑M1/1‑152 (MQ=255)
                                                                                                 tgaggtAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgc                                                                                                                                                      <  1:8820‑M1/250‑102 (MQ=255)
                                                                                                 tgaggtAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgc                                                                                                                                                      <  1:798924‑M1/250‑102 (MQ=255)
                                                                                                  gaggtAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgag                                                                                                                                                                                                                                                     >  1:242625‑M1/1‑148 (MQ=255)
                                                                                                    ggtAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgc                                                                                                                                                      <  1:897658‑M1/247‑102 (MQ=255)
                                                                                                     gtAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacc                                                                                                                                                                                                                            >  1:603817‑M1/1‑145 (MQ=255)
                                                                                                          gAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagtt                                                                                                                                                                                                                   >  1:866972‑M1/1‑140 (MQ=255)
                                                                                                               cAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacgg                                                                                                                                       <  1:506909‑M1/251‑117 (MQ=255)
                                                                                                                 aGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggta                                                                                                                                     >  1:336422‑M1/1‑133 (MQ=255)
                                                                                                                  gACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtag                                                                                                                                    >  1:875557‑M1/1‑132 (MQ=255)
                                                                                                                       gAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaag                                                                                                                                            >  1:321554‑M1/1‑127 (MQ=255)
                                                                                                                        aaaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacac                                                                                                                              <  1:542853‑M1/251‑126 (MQ=255)
                                                                                                                        aaaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacac                                                                                                                              <  1:688795‑M1/251‑126 (MQ=255)
                                                                                                                        aaaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacac                                                                                                                              <  1:621970‑M1/251‑126 (MQ=255)
                                                                                                                        aaaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaaca                                                                                                                               >  1:550889‑M1/1‑126 (MQ=255)
                                                                                                                        aaaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaaca                                                                                                                               >  1:640369‑M1/1‑126 (MQ=255)
                                                                                                                        aaaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgc                                                                                                                                                                                                              <  1:876639‑M1/171‑46 (MQ=255)
                                                                                                                         aaTTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaag                                                                                                                                            >  1:478891‑M1/1‑125 (MQ=255)
                                                                                                                             aaaCAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaatttttggt                                                                                                                         >  1:583003‑M1/1‑121 (MQ=255)
                                                                                                                                cAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgtgttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatt                                                                                                                      >  1:648143‑M1/1‑118 (MQ=255)
                                                                                                                                     gggAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttcta                                                                                                                  >  1:895600‑M1/1‑113 (MQ=255)
                                                                                                                                      ggAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagtt                                                                                                                                                                                                                   >  1:843504‑M1/1‑112 (MQ=255)
                                                                                                                                      ggAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcac                                                                                                                                                                                                                             >  1:590253‑M1/1‑112 (MQ=255)
                                                                                                                                           tAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaa                                                                                                                        >  1:693573‑M1/1‑107 (MQ=255)
                                                                                                                                           tAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacag                                                                                                                                                                                      >  1:20094‑M1/1‑107 (MQ=255)
                                                                                                                                           tAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaag                                                                                                                                                                                                                                         <  1:713140‑M1/125‑19 (MQ=255)
                                                                                                                                                  gCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatt                                                                                                                      <  1:682758‑M1/233‑134 (MQ=255)
                                                                                                                                                          cTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaac                                                                                            <  1:749965‑M1/251‑160 (MQ=255)
                                                                                                                                                                gAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagat                                                                                                                                                                                                >  1:741807‑M1/1‑86 (MQ=255)
                                                                                                                                                                    gATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagat                                                                                                                                                           >  1:347316‑M1/1‑82 (MQ=255)
                                                                                                                                                                          aTTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcag                                                                            >  1:823141‑M1/1‑76 (MQ=255)
                                                                                                                                                                           ttCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgaggg                                                                                                                                                                  >  1:506530‑M1/1‑75 (MQ=255)
                                                                                                                                                                                 cacTAATTCTTGATACGGGTGATCTTTTAGAATTAAATCCAGTGGATAATAAATTTCCTTTAACGGTTAatcgagcgattaagaaagtggaaactg                                                                                                                                                                                                                                >  1:770101‑M1/1‑69 (MQ=255)
                                                                                                                                                                                 cacTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattat                                                                                                                                                                                           <  1:213388‑M1/133‑65 (MQ=255)
                                                                                                                                                                                       aTCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaa                                                               >  1:845051‑M1/1‑63 (MQ=255)
                                                                                                                                                                                       aTCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaa                                                               >  1:305959‑M1/1‑63 (MQ=255)
                                                                                                                                                                                        tCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtcc                                                                                                                                                                                                     <  1:151211‑M1/116‑55 (MQ=255)
                                                                                                                                                                                           tGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagat                                                                                                                                                           <  1:124962‑M1/155‑97 (MQ=255)
                                                                                                                                                                                                           ttAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaa                                           <  1:409677‑M1/251‑209 (MQ=255)
                                                                                                                                                                                                              gAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaag                                          >  1:606547‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                                    aaCCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggagga                                  <  1:117214‑M1/251‑218 (MQ=255)
                                                                                                                                                                                                                     aCCAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggat                                 <  1:67611‑M1/251‑219 (MQ=255)
                                                                                                                                                                                                                       cAAGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaag                                                                                                                                            >  1:11864‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                        aaGTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggattt                               >  1:563517‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                          gTGGATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaaga                                                                 <  1:797393‑M1/214‑187 (MQ=255)
                                                                                                                                                                                                                            ggATAATAAATTTATTTTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaa                                           <  1:179375‑M1/234‑209 (MQ=255)
                                                                                                                                                                                                                                       ttaatttaacgGGTAatcgagcgaataagaaagtggaaaccggacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggatttcggacgttgcttggtt               <  1:103856‑M1/247‑237 (MQ=255)
                                                                                                                                                                                                                                        tatttTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggatttcggacgttgcttggttt              <  1:292563‑M1/251‑238 (MQ=255)
                                                                                                                                                                                                                                        tatttTAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgc                                                     <  1:286056‑M1/212‑199 (MQ=255)
                                                                                                                                                                                                                                            ttAACGGTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggatttcggacgttgcttggtttgtcc          <  1:358672‑M1/251‑242 (MQ=255)
                                                                                                                                                                                                                                                 ggTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggatttcggacgttgcttggtttgtccttcca     >  1:10645‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                  gTTAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggatttcggacgttgcttggtttgtccttccag    >  1:774463‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                                    tAatcgagcgattaagaaagtggaaactgcacccattgagttagtgcaggaagtccaagatattatcacagcaatcgttaatgattgagggcgaagataatgcgaataaaaagtacggtagaaacaccaaaaatttctaccgcacttttctgtttttaaactggtttacttcgtcagatcatcaaagaaacgttttacgccatctaagaagctggaggatttcggacgttgcttggtttgtccttccaggc  <  1:118341‑M1/251‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                         
GTCTTTTTTTGCTTATTAGGAAAAAGAAGTGTTTTTGGGCTGTACTTGATTTTTGTTCTTATTAGGCTAAAATGTATCACAAAATGATACGTTGAGGTGAGGTAATGAATACAAGACTAGAAATTAAACAATGGGGAAATAGCAAGGCAATTCGCTTACCGAAAGATTTTATTCATACACTAAATCTTGATACGGGTGATTTTTTAGAATTAAACCAAGTGGATAATAAATTTATTTTAACGGTTATTCCTAAAAACAGCCCAAAGAAACGATTAACCTTAGATGAACGTTTGCAAAATGAAAACTATCAGATTTTAAATGATTGGGACAATTTTCCTATTGCCGGTGAGGAGTTAATTTAATGTATATTCCTGAACGTGGCGATATTGTAAGAATTTGTTTAAATCCGGTTGTTGGTAATGAAATTCAGGGGGAACAACGACTGGTTTTAGTCATTAGCCCCAAACGTTTTAATCAATATGGATTAATTTTAGT  >  1/1009925‑1010419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑