Predicted mutation
evidence seq id position mutation annotation gene description
MC JC 1 111,888 Δ17 bp intergenic (–/+19230) – / ← unknown –/tRNA‑Ala‑GGC

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ 1 111888 111904 17 61 [0] [0] 61 –/unknown –/tRNA‑Ala‑GGC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 1118870 (0.000)61 (0.700) 47/426 0.6 100% intergenic (–/+19247) –/unknown –/tRNA‑Ala‑GGC
?1 111905 = 0 (0.000)intergenic (–/+19229) –/unknown –/tRNA‑Ala‑GGC

CCGATAGGGGCGCCATCACTCTTCTGACCACCTATAACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGGATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTAGATTTGAATTACTATTTATTGAAGTTTTTGATACATCACCTTTTTCTGAAACTGAAAATACAGCGCCAGTATTAACTACAGGTGTCGGAGTACCGGAACCACCGCCGCCACTTCCGCAAGCTGTAACGGTTAATGATGTTAATACAATAAGACTCAATTTTGAAATTGAGTGTTTAAAATTACTCATAAAAAAACTCCTTAGAAATTAAAGTAATAGTCTAATATTTAATTAATAAT  >  1/111645‑112125
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                              
ccGATAGGGGCGCCATCACTCTTCTGACCACCTATAACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaag                                                                                                                                                                                                                                        >  1:128506‑M1/1‑243 (MQ=255)
                             accTATAACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaa                                                                                                                                                                                                             >  1:876879‑M1/1‑214 (MQ=255)
                              ccTATAACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacc                                                                                                                                                                                                                        <  1:418958‑M1/237‑25 (MQ=255)
                                  taACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaa                                                                                                                                                                                                      >  1:11404‑M1/1‑209 (MQ=255)
                                  taACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttc                                                                                                                                                                                                                  >  1:192363‑M1/1‑209 (MQ=255)
                                          ctacCGGAATAGCGGACTTCACCCGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcg                                                                                                                                                                                               >  1:440479‑M1/1‑201 (MQ=255)
                                                                 cGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcgga                                                                                                                                                                       <  1:700716‑M1/251‑74 (MQ=255)
                                                                 cGCATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcgga                                                                                                                                                                       <  1:580482‑M1/251‑74 (MQ=255)
                                                                   cATTAGGAATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagt                                                                                                                                                                     >  1:250570‑M1/1‑176 (MQ=255)
                                                                                tttAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccg                                                                                                                                                        <  1:691486‑M1/251‑89 (MQ=255)
                                                                                      aaTTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgcca                                                                                                                                                  >  1:38214‑M1/1‑157 (MQ=255)
                                                                                                  gTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaag                                                                                                                                        >  1:746695‑M1/1‑145 (MQ=255)
                                                                                                       aTACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagttccggaaccaccgccgccacttccgcaagctgtaac                                                                                                                                 <  1:480167‑M1/251‑112 (MQ=255)
                                                                                                       aTACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaac                                                                                                                                 <  1:282482‑M1/251‑112 (MQ=255)
                                                                                                        tACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacg                                                                                                                                <  1:327654‑M1/251‑113 (MQ=255)
                                                                                                         aCTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacgg                                                                                                                               <  1:565508‑M1/251‑114 (MQ=255)
                                                                                                                cATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatga                                                                                                                        <  1:515661‑M1/251‑121 (MQ=255)
                                                                                                                      ggAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatac                                                                                                                                                                                                   <  1:867325‑M1/170‑46 (MQ=255)
                                                                                                                       gAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagt                                                                                                                                                                     >  1:596889‑M1/1‑124 (MQ=255)
                                                                                                                            cttctGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaat                                                                                                            <  1:713254‑M1/251‑133 (MQ=255)
                                                                                                                                 gTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatac                                                                                                               <  1:843792‑M1/243‑130 (MQ=255)
                                                                                                                                  tCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagac                                                                                                       <  1:42350‑M1/250‑138 (MQ=255)
                                                                                                                                   cTTAGAAGAAAAAAACCCAGATTGATAAAGGCTATTGTTCTCGCCTAAAAAACTATAACTATCAAAATCTTAAAGTAGATTAATTTAATGTCCAGCAATATCTAACGCTTTTaattgaagtttttgatacatcccctttttctgaaactgaaaatacggtgccagtgttaactacaggtgtgggagtacgggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatac                                                                                                               <  1:196024‑M1/241‑130 (MQ=255)
                                                                                                                                           ataaataaCCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggag                                                                                                                                                                      <  1:67347‑M1/178‑75 (MQ=255)
                                                                                                                                            taaataaCCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggtt                                                                                                                             >  1:440000‑M1/1‑103 (MQ=255)
                                                                                                                                            taaataaCCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggctaatgatgttaatac                                                                                                               >  1:7818‑M1/1‑103 (MQ=255)
                                                                                                                                                     atatTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgt                                                                                   >  1:578434‑M1/1‑94 (MQ=255)
                                                                                                                                                          gATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgttt                                                                                 <  1:177099‑M1/248‑160 (MQ=255)
                                                                                                                                                          gATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaat                                                                                          >  1:466390‑M1/1‑89 (MQ=255)
                                                                                                                                                          gATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatac                                                                                                               <  1:482180‑M1/218‑130 (MQ=255)
                                                                                                                                                          gATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatg                                                                                                                      <  1:886315‑M1/211‑123 (MQ=255)
                                                                                                                                                          gATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactac                                                                                                                                                                                 >  1:255278‑M1/1‑89 (MQ=255)
                                                                                                                                                            aaaagGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaat                                                                            <  1:452603‑M1/250‑165 (MQ=255)
                                                                                                                                                               aGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatac                                                                                                               >  1:395781‑M1/1‑84 (MQ=255)
                                                                                                                                                                ggCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaatta                                                                          >  1:268975‑M1/1‑83 (MQ=255)
                                                                                                                                                                       gTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatac                                                                                                               >  1:571596‑M1/1‑76 (MQ=255)
                                                                                                                                                                       gTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacgg                                                                                                                               <  1:591638‑M1/189‑114 (MQ=255)
                                                                                                                                                                               cTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatac                                                                                                                                                                                                   >  1:502877‑M1/1‑68 (MQ=255)
                                                                                                                                                                                     aactataactatCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattt                                                                                                >  1:836575‑M1/1‑62 (MQ=255)
                                                                                                                                                                                              tatCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaa                                          >  1:537122‑M1/1‑53 (MQ=255)
                                                                                                                                                                                                   gAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaac                                                             >  1:519267‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                      tCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaac                                                             >  1:378499‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                      tCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggag                                                                                                                                                                      >  1:618655‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                         tCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatat                               <  1:335167‑M1/251‑210 (MQ=255)
                                                                                                                                                                                                                gATTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaact                                                                                                                                                                                   <  1:134513‑M1/96‑62 (MQ=255)
                                                                                                                                                                                                                 aTTAATTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatatttaatta                        <  1:840608‑M1/250‑217 (MQ=255)
                                                                                                                                                                                                                     aTTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcccctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaag                                             <  1:506606‑M1/225‑196 (MQ=255)
                                                                                                                                                                                                                     aTTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaat                                                                            >  1:205785‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                     aTTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatac                                                                                                               >  1:133286‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                     aTTTTATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaac                                                                                                                                                                                    <  1:367039‑M1/90‑61 (MQ=255)
                                                                                                                                                                                                                       tttATGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcccctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatatttaattaataatcc                 <  1:307082‑M1/251‑224 (MQ=255)
                                                                                                                                                                                                                        ttATGTCCAGCAATATCTAACGCTTTTtattgagttttttgatacctcgcctttttctgaaactgaaaatacagcgccagtattacctacaggtgtcggagtcccggacccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatatttaattaataatccc                <  1:854337‑M1/251‑225 (MQ=255)
                                                                                                                                                                                                                          aTGTCCAGCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaac                                                                                                                                 >  1:900562‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                 gCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagt                                            >  1:149629‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                 gCAATATCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaac                                                             >  1:37160‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                  cAATATCTAACGCTTTTtattgaagtttttgatacatcccctttttcggaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggacccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatatttaattaataatcccactaaat         <  1:826825‑M1/248‑232 (MQ=255)
                                                                                                                                                                                                                                      atCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatatttaattaataatcccactaaattttataa  >  1:39068‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                      atCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaattgagtgtttaaaattactcataaaaaaactccttagaaattaaagtaatagtctaatat                               <  1:557517‑M1/222‑210 (MQ=255)
                                                                                                                                                                                                                                      atCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgat                                                                                                                       >  1:166177‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                      atCTAACGCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacgg                                                                                                                               <  1:290010‑M1/126‑114 (MQ=255)
                                                                                                                                                                                                                                             gCTTTTtattgaagtttttgatacatcacctttttctgaaactgaaaatacagcgccagtattaactacaggtgtcggagtaccggaaccaccgccgccacttccgcaagctgtaacggttaatgatgttaatacaataagactcaattttgaaa                                                                                           >  1:728010‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                              
CCGATAGGGGCGCCATCACTCTTCTGACCACCTATAACTACACTACCGGAATAGCGGACTTCACCCGCATTAGGGATATTTTTAGCAATTTCTCCATTGTAAAATACTTGATCATTAGGGAAATCTTCTGTCTTAGAAGATAAATAACCATATTGATAAAGGCTATTGTTCTCGCCTATAAAACTATAACTATCAGAATCTTCAAGTAGATTAATTTTATGTCCAGCAATATCTAACGCTTTTAGATTTGAATTACTATTTATTGAAGTTTTTGATACATCACCTTTTTCTGAAACTGAAAATACAGCGCCAGTATTAACTACAGGTGTCGGAGTACCGGAACCACCGCCGCCACTTCCGCAAGCTGTAACGGTTAATGATGTTAATACAATAAGACTCAATTTTGAAATTGAGTGTTTAAAATTACTCATAAAAAAACTCCTTAGAAATTAAAGTAATAGTCTAATATTTAATTAATAAT  >  1/111645‑112125

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑