Predicted mutation
evidence seq id position mutation annotation gene description
MC JC 1 163,530 Δ19 bp intergenic (‑28079/+50149) unknown ← / ← unknown SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ 1 163530 163548 19 85 [0] [0] 85 unknown/unknown SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 1635290 (0.000)85 (0.960) 59/430 0.3 100% intergenic (‑28078/+50168) unknown/unknown SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG
?1 163549 = 0 (0.000)intergenic (‑28098/+50148) unknown/unknown SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG

CCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAACTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTGTTGTAATCGCTTCAATGGCGCACGCGGTTAATAAACGATGTACATTCCCTAAATTACCCCCTGAAATCGTATGAATTTTTGTCGCTAACTCTGGCGATTGTAGATTAGAGCATTTTTTCAATGGCAAAATACCTTGAAATTGGAAGAGTAATTTTTGAAAATCCTTATCTAATTTCCATGTTGGCAACTCTGCTACATCAAAACGACTGGCGTGTTGCGGATCGGTGTGTAAAACACGAATT  >  1/163293‑163772
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                   
cccTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCATAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaat                                                                                                                                                                                                                                       >  1:444956‑M1/1‑237 (MQ=255)
   tctatctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaa                                                                                                                                                                                                                                    <  1:646505‑M1/251‑18 (MQ=255)
    ctatctaAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                                                                                                                                                                   <  1:629132‑M1/251‑19 (MQ=255)
            aTCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtaca                                                                                                                                                                                                                           >  1:341208‑M1/1‑225 (MQ=255)
             tCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaata                                                                                                                                                                                                                                      <  1:510887‑M1/239‑16 (MQ=255)
                tatatCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattc                                                                                                                                                                                                                        >  1:611268‑M1/1‑221 (MQ=255)
                tatatCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                                                                                                                                                                   <  1:697876‑M1/239‑19 (MQ=255)
                   atCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacat                                                                                                                                                                                                                          <  1:9578‑M1/245‑28 (MQ=255)
                          gTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                                                                                                                                                                   >  1:339304‑M1/1‑211 (MQ=255)
                                actgatcccAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctga                                                                                                                                                                                                       >  1:267585‑M1/5‑205 (MQ=255)
                                aCTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctga                                                                                                                                                                                                       >  1:73096‑M1/1‑205 (MQ=255)
                                   tATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaat                                                                                                                                                                                                    <  1:366088‑M1/251‑50 (MQ=255)
                                          aTAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccc                                                                                                                                                                                                            >  1:697901‑M1/1‑195 (MQ=255)
                                                  cAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaata                                                                                                                                                                                                                                      <  1:26933‑M1/202‑16 (MQ=255)
                                                        aTGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgtacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaa                                                                                                                                                                               >  1:250189‑M1/1‑181 (MQ=255)
                                                          gTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatc                                                                                                                                                                                                   >  1:599331‑M1/1‑179 (MQ=255)
                                                                 gCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcga                                                                                                                                                                      >  1:380631‑M1/1‑172 (MQ=255)
                                                                 gCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaat                                                                                                                                                                                                    >  1:341739‑M1/1‑172 (MQ=255)
                                                                      gTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtac                                                                                                                                                                                                                            <  1:275427‑M1/192‑26 (MQ=255)
                                                                      gTACCACAATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                                                                                                                                                                   <  1:228946‑M1/185‑19 (MQ=255)
                                                                          cacaATCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt                                                                                                                                                             <  1:494114‑M1/251‑89 (MQ=255)
                                                                             aaTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattaga                                                                                                                                                          >  1:652063‑M1/1‑160 (MQ=255)
                                                                              aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagag                                                                                                                                                         >  1:23627‑M1/1‑159 (MQ=255)
                                                                              aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagag                                                                                                                                                         >  1:399383‑M1/1‑159 (MQ=255)
                                                                              aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt                                                                                                                                                             <  1:254352‑M1/247‑89 (MQ=255)
                                                                              aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaat                                                                                                                                                                                                    <  1:68134‑M1/208‑50 (MQ=255)
                                                                              aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccc                                                                                                                                                                                                            >  1:700745‑M1/1‑159 (MQ=255)
                                                                              aTCTAAGGCGGCACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaata                                                                                                                                                                                                                                      >  1:857901‑M1/1‑159 (MQ=255)
                                                                                     gcggcACGAATGAGCCACGAGCTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcatttt                                                                                                                                                   <  1:417583‑M1/250‑99 (MQ=255)
                                                                                                       gagctgaTGCTTTCATTGAGGTAAAGCGGTGTCCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                                                                                                                                                                   <  1:387289‑M1/149‑19 (MQ=255)
                                                                                                            gATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaat                                                                                                                           >  1:529718‑M1/1‑129 (MQ=255)
                                                                                                                cTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaac                                                                                                                                                                                                                                   <  1:5132‑M1/143‑19 (MQ=255)
                                                                                                                    cATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcg                                                                                                                                                                       <  1:582835‑M1/199‑79 (MQ=255)
                                                                                                                           gTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt                                                                                                                                                             >  1:875532‑M1/1‑114 (MQ=255)
                                                                                                                                   gtgtTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaatac                                                                                                                                   >  1:788489‑M1/1‑106 (MQ=255)
                                                                                                                                   gtgtTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagc                                                                                                                                                        <  1:649257‑M1/199‑94 (MQ=255)
                                                                                                                                    tgtTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatcc                                                                                                   <  1:730106‑M1/251‑147 (MQ=255)
                                                                                                                                                   tGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccat                                                                                    >  1:672950‑M1/1‑90 (MQ=255)
                                                                                                                                                            ccGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaac                                                                           <  1:574923‑M1/251‑171 (MQ=255)
                                                                                                                                                            ccGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaac                                                                           <  1:378158‑M1/251‑171 (MQ=255)
                                                                                                                                                                   tttttCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgcta                                                                    <  1:471707‑M1/251‑178 (MQ=255)
                                                                                                                                                                    ttttCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctac                                                                   <  1:421050‑M1/251‑179 (MQ=255)
                                                                                                                                                                      ttCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacat                                                                 <  1:103995‑M1/251‑181 (MQ=255)
                                                                                                                                                                             gCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaac                                                           >  1:160811‑M1/1‑64 (MQ=255)
                                                                                                                                                                               ccTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacga                                                         >  1:372550‑M1/1‑62 (MQ=255)
                                                                                                                                                                                  gCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaa                                                            >  1:389818‑M1/1‑59 (MQ=255)
                                                                                                                                                                                  gCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattcc                                                                                                                                                                                                                       <  1:599779‑M1/89‑31 (MQ=255)
                                                                                                                                                                                       ggttgTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgt                                                >  1:832400‑M1/1‑54 (MQ=255)
                                                                                                                                                                                       ggttgTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgt                                                >  1:344866‑M1/1‑54 (MQ=255)
                                                                                                                                                                                       ggttgTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt                                                                                                                                                             >  1:198911‑M1/1‑54 (MQ=255)
                                                                                                                                                                                       ggttgTACCCATGAATTATGCTCGATAATATCT‑ATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgtt                                               >  1:484542‑M1/1‑53 (MQ=255)
                                                                                                                                                                                           gTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgc                                             >  1:527002‑M1/1‑50 (MQ=255)
                                                                                                                                                                                              cccATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggat                                         <  1:665958‑M1/251‑205 (MQ=255)
                                                                                                                                                                                              cccATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaat                                                                                                                                                                                                                 >  1:246040‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                cATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaa                                                                                           >  1:664688‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                   gAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaat                                                                                                                                     <  1:47860‑M1/154‑113 (MQ=255)
                                                                                                                                                                                                   gAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTcgcac                                                                                                                                                                                                                                                >  1:164849‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                             cGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacac                          <  1:867761‑M1/251‑220 (MQ=255)
                                                                                                                                                                                                             cGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaaca                           >  1:340202‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                             cGATAATATCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaaca                           >  1:680552‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                               ataataTCTAATGTAATTTGCTCTGTTCCTcgcgcgcggttaataaacgatgtacattccctaaagtccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt                                                                                                                                                              <  1:222696‑M1/117‑88 (MQ=255)
                                                                                                                                                                                                               ataataTCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacga                        >  1:337099‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                               ataataTCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacga                        >  1:685772‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                               ataataTCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactc                                                                         <  1:371121‑M1/202‑173 (MQ=255)
                                                                                                                                                                                                               ataataTCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatc                                                                                              <  1:190725‑M1/181‑152 (MQ=255)
                                                                                                                                                                                                               ataataTCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattc                                                                                                                                                                                                                        <  1:684040‑M1/59‑30 (MQ=255)
                                                                                                                                                                                                                   tatCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattg                    >  1:714710‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                   tatCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatct                                                                                             <  1:364210‑M1/178‑153 (MQ=255)
                                                                                                                                                                                                                   tatCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaat                                                                                                                           >  1:74035‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                   tatCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttc                                                                                                                                                <  1:621650‑M1/127‑102 (MQ=255)
                                                                                                                                                                                                                    atCTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattg                    >  1:96220‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                      cTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaa                              <  1:884160‑M1/238‑216 (MQ=255)
                                                                                                                                                                                                                      cTAATGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatcc                                                                                                   >  1:838448‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                        aaTGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattgcat                 >  1:666226‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                        aaTGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaag                                                                                                                     <  1:846456‑M1/149‑129 (MQ=255)
                                                                                                                                                                                                                        aaTGTAATTTGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagatt                                                                                                                                                             >  1:378683‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                               tttGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattgcatcttttgtgc        <  1:331775‑M1/251‑238 (MQ=255)
                                                                                                                                                                                                                                ttGCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattgcatcttttgtgcc       <  1:749702‑M1/251‑239 (MQ=255)
                                                                                                                                                                                                                                  gCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattgcatcttttgtgccta     >  1:258340‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                  gCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaa                              <  1:786348‑M1/226‑216 (MQ=255)
                                                                                                                                                                                                                                  gCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgcta                                                                    <  1:641978‑M1/188‑178 (MQ=255)
                                                                                                                                                                                                                                  gCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggca                                                                             >  1:400987‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                  gCTCTGTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaat                                                                                                     >  1:218673‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                       gTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagcattttttcaatggcaaaataccttgaaattggaagagtaatttttgaaaatccttatctaatttccatgttggcaactctgctacatcaaaacgactggcgtgttgcggatcggtgtgtaaaacacgaattgcatcttttgtgcctacgc  >  1:742453‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                       gTTCCTcgcacgcggttaataaacgatgtacattccctaaattaccccctgaaatcgtatgaatttttgtcgctaactctggcgattgtagattagagc                                                                                                                                                        <  1:417850‑M1/99‑94 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                   
CCCTCTATCTAAATCATATATCCATAGTCGCCACTTATCCCAATAAAATCCAGTAAATGTAATCGGCTCTGTACCACAATCTAAGGCGGCACGAATGAGCCACGAACTGATGCTTTCATTGAGGTAAAGCGGTGTTCGAATAATCCTTGATTTTATCCGATAATTTTTCGTAAGCCCTGCGTTGGTTGTACCCATGAATTATGCTCGATAATATCTAATGTAATTTGCTCTGTTCCTGTTGTAATCGCTTCAATGGCGCACGCGGTTAATAAACGATGTACATTCCCTAAATTACCCCCTGAAATCGTATGAATTTTTGTCGCTAACTCTGGCGATTGTAGATTAGAGCATTTTTTCAATGGCAAAATACCTTGAAATTGGAAGAGTAATTTTTGAAAATCCTTATCTAATTTCCATGTTGGCAACTCTGCTACATCAAAACGACTGGCGTGTTGCGGATCGGTGTGTAAAACACGAATT  >  1/163293‑163772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑