Predicted mutation
evidence seq id position mutation annotation gene description
JC 1 1,982,864 Δ3 bp intergenic (‑219/+117) unknown ← / ← unknown RTX toxin activating lysine‑acyltransferase (EC 2.3.1.‑)/hypothetical protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 19828630 (0.000)21 (0.240) 19/428 2.9 100% intergenic (‑218/+120) unknown/unknown RTX toxin activating lysine‑acyltransferase (EC 2.3.1.‑)/hypothetical protein
?1 1982867 = 0 (0.000)intergenic (‑222/+116) unknown/unknown RTX toxin activating lysine‑acyltransferase (EC 2.3.1.‑)/hypothetical protein

ATATACAAAATAACTTACACGATCGCATTACAGAAAATGCCAAACTCATTACGAAATCAAATAGACTATGATTTAATTATTATTGTTAAACAATAAATAGAAATATAACTTATTTAACCTTATATTACAGGAATATATTCAAGCTTTATTATTTTGCATAATAAACCTATTTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGGTTTAGGGCGATGTCTACAATATTGTGTAATC  >  1/1982696‑1983112
                                                                                                                                                                           |                                                                                                                                                                                                                                                     
acaatatacaaaataacttacacgatcgcatgacagaaaatgccaaactcattacgaaatcaaatagactatgatttaattattattgttaaacaataaatagaaatataacttatttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAAt                                                                                                                                                                        >  1:511705‑M2/172‑251 (MQ=255)
   atatacaaaataacttacacgatcgcatgacagaaaatgccaaactcattacgaaatcaaatagactatgatttaattattattgttaaacaataaatagaaatataacttatttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGaa                                                                                                                                                                     >  1:654857‑M2/169‑251 (MQ=255)
                                                            caaatagactatgatttaattattattgttaaacaataaatagaaatataacttatttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAg                                                                                                            >  1:598612‑M2/112‑251 (MQ=255)
                                                                                                       aaatataacttatttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGc                                                                                                                                              <  1:753047‑M2/106‑1 (MQ=255)
                                                                                                                 tatttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATagc                                                                                                                                      <  1:491005‑M2/114‑1 (MQ=255)
                                                                                                                 tatttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAggg                                                       >  1:264296‑M2/59‑251 (MQ=255)
                                                                                                                  atttaaccttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTagag                                                         <  1:122716‑M2/191‑1 (MQ=255)
                                                                                                                       accttatattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATagcag                                                                                                                                    >  1:891182‑M2/53‑168 (MQ=255)
                                                                                                                            atattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTaaa                                                                                                                                                                                >  1:521867‑M2/48‑119 (MQ=255)
                                                                                                                            atattacaggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTa                                            >  1:792309‑M2/48‑251 (MQ=255)
                                                                                                                                  caggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATagc                                                                                                                                      >  1:172852‑M2/42‑155 (MQ=255)
                                                                                                                                  caggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTag                                                           <  1:473296‑M2/189‑1 (MQ=255)
                                                                                                                                    ggaatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACttttttt                                    >  1:175716‑M2/40‑251 (MQ=255)
                                                                                                                                      aatatattcaagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGTTTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGATGGGTAATTTTAAATTTAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTag                                                           >  1:674777‑M2/38‑226 (MQ=255)
                                                                                                                                      aatatattcaagctttattatttcgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATagcag                                                                                                                                    <  1:759985‑M2/116‑1 (MQ=255)
                                                                                                                                               aagctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGc                         <  1:18919‑M2/223‑1 (MQ=255)
                                                                                                                                                  ctttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATagcag                                                                                                                                    <  1:16271‑M2/116‑1 (MQ=255)
                                                                                                                                                    ttattattttgcataataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCa                                                                     <  1:180483‑M2/179‑1 (MQ=255)
                                                                                                                                                                 taataaacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATATACTTTTTTTAGATTTAGGGCGATGTCTACAATATtgtg       >  1:828723‑M2/11‑251 (MQ=255)
                                                                                                                                                                      aacctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGATTTAGGGCGATGTCTACAATATTGTGTAATc  <  1:865012‑M2/246‑1 (MQ=255)
                                                                                                                                                                        cctTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAggg                                                                                                          <  1:533682‑M2/142‑1 (MQ=255)
                                                                                                                                                                           |                                                                                                                                                                                                                                                     
ATATACAAAATAACTTACACGATCGCATTACAGAAAATGCCAAACTCATTACGAAATCAAATAGACTATGATTTAATTATTATTGTTAAACAATAAATAGAAATATAACTTATTTAACCTTATATTACAGGAATATATTCAAGCTTTATTATTTTGCATAATAAACCTATTTAATTTAAATGAGTGATTCGTAGTTGGGTAAAAATAAAGTCGGCTTCAGATTATTTCTTATATATTTTTAAATTTACAATGAAAACCGGGATTTGATCTTCATAGCTATATAGCAGCTAGCCCCATGGCAACGGTAGAAGGGTAATTTTAAATTCAGTTAATCGTCTGCGTAATAAGCAAGAGAGGTAGAGGGGGAAGTATTTACTTTTTTTAGGTTTAGGGCGATGTCTACAATATTGTGTAATC  >  1/1982696‑1983112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.