| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP028101 | 2039308 = | 205 (1.140) | 9 (0.050) | 7/422 | 3.0 | 3.2% | coding (640/3531 nt) | C7Y58_09910 | autotransporter |
| ? | CP028101 | 2039518 = | 357 (2.080) | coding (430/3531 nt) | C7Y58_09910 | autotransporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATATAACAATGTTACCTTTGAAGAAGGAAGTGATACTACATTAATAGGTGGAGCCTATGGATTAATGGCAAATAAAGGAACTATAAAAAAAGGTGCTAAAGTAACACTAATGGGTAACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP028101/2039508‑2039308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgcaaataCTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGCAACACTAACTCCTCTGACAAGAATCCCTTTACCTTCTTTACTACTATGAAATTGTCTTAATATATCTCCACTAT > CP028101/2039518‑2039736 GATATAACAATGTTACCTTTGAAGAAGGAAGTGATACTACATTAATAGGTGGAGCCTATGGATTAATGGCAAATAAAGGAACTATAAAAAAAGGTGCTAAAGTAACACTAATGGGTAACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCA > 1:21763/1‑251GATATAACAATGTTACCTTTGAAGAAGGAAGTGATACTACATTAATAGGTGGAGCCTATGGATTAATGGCAAATAAAGGAACTATAAAAAAAGGTGCTAAAGTAACACTAATGGGTAACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCA > 1:57343/1‑251 ATATAACCATGTTACCTTTGAAGAAGGAAGTGATACTACATTAATAGGTGGAGCCTATGGATTAATGGCAAATAAAGGAACTATAAAAAAAGGTGCTAAAGTAACACTAATGGGTAACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAA > 1:912625/1‑251 ACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGC < 1:838362/229‑1 ACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGC > 2:838362/1‑229 CTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGCAACACT > 1:69094/1‑234 CTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGCAACACT < 2:69094/234‑1 ATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGCAACACTAACTCCTCTGACAAGAATCCCTTTACCTTCTTTACTACTATGAAATTGTCTTAATATATCTCCACTAT < 2:21763/251‑1 ATCAGGTTCTGAGTTAAATATACTTGCAAATACTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGCAACACTAACTCCTCTGACAAGAATCCCTTTACCTTCTTTACTACTATGAAATTGTCTTAATATATCTCCACTAT < 2:57343/251‑1 GATATAACAATGTTACCTTTGAAGAAGGAAGTGATACTACATTAATAGGTGGAGCCTATGGATTAATGGCAAATAAAGGAACTATAAAAAAAGGTGCTAAAGTAACACTAATGGGTAACTATGGAACTGGAAAATTTGAAGTAAAAGAACATGATCGTTTAACATTTGAATCAGGTTCTGAGTTAAATATACTTGCAAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP028101/2039508‑2039308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgcaaataCTCCAGCAATACCACCTTTTACAAAAGTTTTTGAGCCTTTCTTAAATTCAATTTCTCCTTGACCATTAGAAGTTGTTTTATCAAAACCAATACCAGCTCCTGAACTTTCTATTCTAGTATTCCCTTCAGTAGTAAATTTTTTAGCAACACTAACTCCTCTGACAAGAATCCCTTTACCTTCTTTACTACTATGAAATTGTCTTAATATATCTCCACTAT > CP028101/2039518‑2039736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |