New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP028101	= 131134	238 (1.030)	4 (0.020)	3/272	16.3	1.8%	intergenic (+28/+36)	C7Y58_00635/C7Y58_00640	ribosome‑recycling factor/preprotein translocase subunit SecY
	?	CP028101	= 131139	221 (1.050)					intergenic (+33/+31)	C7Y58_00635/C7Y58_00640	ribosome‑recycling factor/preprotein translocase subunit SecY
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAATGTTCAAACTTTAACTGATAAATATGTTAAAGAAATTGATGATTTACTTGCTAAAAAAGAAAAAGAAATTACTACAATCTAAGTAAATAGTGTTAATAAAAAAGATAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/131022‑131134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaagataggtTTTTGACCTATCTTTTTTATTAACACTATTTACTTAGATTGTAGTAATTTCTTTTTCTTTTTTAGCA  <  CP028101/131139‑131073                                                                                                                                                                                      AAATGTTCAAACTTTAACTGATAAATATGTTAAAGAAATTGATGATTTACTTGCTAAAAAAGAAAAAGAAATTACTACAATCTAAGTAAATAGTGTTAATAAAAAAGATAGGTTTTTGACCTATCTTTTTTATTAACACTATTTACTTAG                                <  1:1629592/150‑1 AAATGTTCAAACTTTAACTGATAAATATGTTAAAGAAATTGATGATTTACTTGCTAAAAAAGAAAAAGAAATTACTACAATCTAAGTAAATAGTGTTAATAAAAAAGATAGGTTTTTGACCTATCTTTTTTATTAACACTATTTACTTAG                                <  1:1629598/150‑1    TGTTCAAACTTTAACTGATAAATATGTTAAAGAAATTGATGATTTACTTGCTAAAAAAGAAAAAGAAATTACTACAATCTAAGTAAATAGTGTTAATAAAAAAGATAGGTTTTTGACCTATCTTTTTTATTAACACTATTTACTTAGATT                             <  1:2071285/150‑1                               TAAAGAAATTGATGATTTACTTGCTAAAAAAGAAAAAGGAATTACTACAATCTAAGTAAATAGTGTTAATGAAAAAGATAGGTTTTTGACCTATCTTTTTTATTAACACTATTTACTTAGATTGTAGTAATTTCTTTTTCTTTTTTAGCA  <  1:2064591/150‑1                                                                                                                                                                                      AAATGTTCAAACTTTAACTGATAAATATGTTAAAGAAATTGATGATTTACTTGCTAAAAAAGAAAAAGAAATTACTACAATCTAAGTAAATAGTGTTAATAAAAAAGATAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/131022‑131134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaagataggtTTTTGACCTATCTTTTTTATTAACACTATTTACTTAGATTGTAGTAATTTCTTTTTCTTTTTTAGCA  <  CP028101/131139‑131073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.