| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP028101 | = 82578 | 400 (0.840) | 10 (0.030) | 9/238 | 20.3 | 3.1% | coding (495/504 nt) | C7Y58_00325 | hypothetical protein |
| ? | CP028101 | = 82548 | 298 (0.790) | coding (1582/1584 nt) | C7Y58_00320 | potassium/proton antiporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATTAGAGAACTTGATAAAAATACTTTAATTGTTATGATTAAAAGAAATGATGTTGCTATGATTCCAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP028101/82430‑82578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaaataaggcaattgccttatttttttATCTGTCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAACATCATTTCTTTT < CP028101/82548‑82470 TATTAGAGAACTTGATAAAGATACTTTAATTGTTATGATTAAAAGAAATGATGTTGCTATGATTCCAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAAGAAGGCAATTGCCTTATTTTTTTA < 2:836588/150‑1TATTAGAGAACTTGATAAAAATACTTTAATTGTTATGATTAAAAGAAATGATGTTGCTATGATTCCAAGTGGAGAGACAACTCTACTAGAAAATGATATTTTGGTATTACCTGACAGATAAAAAAATAAGGCAACTGCCTTCTTTTTTTA > 1:2389821/1‑150TATTAGAGAACTTGATAAAAATACTTTAATTGTTATGATTAAAAGAAATGATGTTGCTATGATTCCAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTTA < 2:836591/150‑1 AACTTGATAAAAATACTTTAATGGTTATGATTAAAAGAAATGATGTTGCTATGATTCCAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTTATCTGTCAA < 1:1052522/150‑1 ATTCCAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGAAAGTGCCTTATTTTTTTATCTGTCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATA > 2:210035/1‑150 CAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGAGAAAAAAATAAGGCAATTGCCTTATTTTTTTATCTGTCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAA < 1:1087176/150‑1 GAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTTATCTGTCAAGTAATACCAAAATATCATCTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAACCTCAT > 2:3435861/1‑150 ACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTTATCTGTCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAACATCATTTCTT < 1:78370/150‑1 CAACTCTAGTAGAAAATAATATTTTGGGATTACTTGACAGATAAAAAAATAATGCCATTGCCTTATTTTTCTATCTGGCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAACATCATTTCTTT < 2:1688252/150‑1 AACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTTATCTGTCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAACATCATTTCTTTT < 2:1044782/150‑1 TATTAGAGAACTTGATAAAAATACTTTAATTGTTATGATTAAAAGAAATGATGTTGCTATGATTCCAAGTGGAAATACAACTCTATTAGAAAATGATATTTTGGTATTACTTGACAGATAAAAAAATAAGGCAATTGCCTTATTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP028101/82430‑82578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaaataaggcaattgccttatttttttATCTGTCAAGTAATACCAAAATATCATTTTCTAATAGAGTTGTATTTCCACTTGGAATCATAGCAACATCATTTCTTTT < CP028101/82548‑82470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |