New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_117 = 7743 (0.480)34 (0.420) 27/292 2.3 32.5% intergenic (–/+1345) –/nleF –/Effector protein NleF
?Xen14_7 136257 = 99 (1.320)coding (569/651 nt) zinT Metal‑binding protein ZinT

Only 100 of 136 total aligned reads displayed.

AGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAG  >  Xen14_7/136108‑136406
                                                                                                                                                     |                                                                                                                                                     
aGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTAtt                                                                                                                                                       <  1:3121130/150‑1 (MQ=255)
aGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTAtt                                                                                                                                                       <  1:1739106/150‑1 (MQ=255)
aGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTAtt                                                                                                                                                       <  1:1739105/150‑1 (MQ=255)
    aaGAAATGCGTTTTTTACTTGTTCGAATGTAAAGATCCTGAAAGGAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGAGTCCCAGCAATCTTTATtgaat                                                                                                                                                   <  1:3971711/150‑1 (MQ=255)
         ctctccgtcggttcaaTTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAAt                                                                                                                                              <  1:3250457/135‑1 (MQ=255)
         aGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAAt                                                                                                                                              <  1:2385399/150‑1 (MQ=255)
          ggCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATg                                                                                                                                             >  1:710115/1‑150 (MQ=255)
           gCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATgg                                                                                                                                            >  1:68595/1‑150 (MQ=255)
            cgttcgttACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGa                                                                                                                                           >  1:979071/1‑150 (MQ=255)
                 gttACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCCATCTTTATTGAATGAAATGGAAAACt                                                                                                                                      >  1:1858184/1‑150 (MQ=255)
                 gttACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTCCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACt                                                                                                                                      >  1:3999020/1‑150 (MQ=255)
                        aTTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAAc                                                                                                                               >  1:978676/1‑150 (MQ=255)
                            gAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATGTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTCATGGGTAATGATTCCTAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGtat                                                                                                                           <  1:2786132/150‑1 (MQ=255)
                              aTGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGtatta                                                                                                                         >  1:839041/1‑150 (MQ=255)
                               tGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGtattat                                                                                                                        <  1:3338156/150‑1 (MQ=255)
                                 tAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATcc                                                                                                                      >  1:2882691/1‑150 (MQ=255)
                                 tAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATcc                                                                                                                      <  1:3598876/150‑1 (MQ=255)
                                 tAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATcc                                                                                                                      >  1:420116/1‑150 (MQ=255)
                                  aaaGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATccc                                                                                                                     >  1:2203921/1‑150 (MQ=255)
                                  aaaGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATccc                                                                                                                     >  1:627892/1‑150 (MQ=255)
                                       tCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCa                                                                                                                >  1:2554397/1‑150 (MQ=255)
                                       tCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCa                                                                                                                >  1:1368881/1‑150 (MQ=255)
                                        ccTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAg                                                                                                               >  1:926342/1‑150 (MQ=255)
                                        ccTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAg                                                                                                               >  1:882991/1‑150 (MQ=255)
                                        ccTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAg                                                                                                               <  1:2085127/150‑1 (MQ=255)
                                         cTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGt                                                                                                              >  1:2772307/1‑150 (MQ=255)
                                         cTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATAGGTAATGATTCACAGCAACCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGt                                                                                                              >  1:795135/1‑150 (MQ=255)
                                             aaGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATCATCCCTATCAGTTGAg                                                                                                          <  1:1216897/150‑1 (MQ=255)
                                                tAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAg                                                                                                       >  1:1836538/1‑150 (MQ=255)
                                                      cccTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCgaaga                                                                                                 <  1:3980932/150‑1 (MQ=255)
                                                          aaaTATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTg                                                                                             <  1:2894505/150‑1 (MQ=255)
                                                           aaTATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTgg                                                                                            <  1:3143801/150‑1 (MQ=255)
                                                                ataCAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCgag                                                                                       <  1:367992/150‑1 (MQ=255)
                                                                ataCAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCgag                                                                                       <  1:2832023/150‑1 (MQ=255)
                                                                ataCAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTCCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCgag                                                                                       >  1:2610954/1‑150 (MQ=255)
                                                                          gCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCgag                                                                                       >  1:1266262/1‑140 (MQ=255)
                                                                             aTCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGtctc                                                                          <  1:1027916/150‑1 (MQ=255)
                                                                               cATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGAAATCTTTATTGAATGAAATGGAAAACTGGCCAGCGTATTATCCCTATCAGTCGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCAt                                                                        >  1:1054096/1‑150 (MQ=255)
                                                                                   taATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAt                                                                    >  1:3055264/1‑150 (MQ=255)
                                                                                    aaTTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAtt                                                                   <  1:3375994/150‑1 (MQ=255)
                                                                                      ttGCACCACGAATATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAtttt                                                                 <  1:3440113/150‑1 (MQ=255)
                                                                                       tGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAttttt                                                                >  1:2089736/1‑150 (MQ=255)
                                                                                       tGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAttttt                                                                >  1:2089732/1‑150 (MQ=255)
                                                                                         caccacGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAttttttt                                                              <  1:1418755/150‑1 (MQ=255)
                                                                                         caccacGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGAttttttt                                                              >  1:3108498/1‑150 (MQ=255)
                                                                                          accacGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTg                                                             <  1:836058/150‑1 (MQ=255)
                                                                                            cacGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTgcg                                                           >  1:755220/1‑150 (MQ=255)
                                                                                              cGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCt                                                         >  1:642659/1‑150 (MQ=255)
                                                                                               gAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTg                                                        >  1:3292691/1‑150 (MQ=255)
                                                                                                    actataatttaccaagacaaataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTc                                                   >  1:2692887‑M2/50‑150 (MQ=255)
                                                                                                      atcTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGTAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAg                                                 >  1:2981192/1‑150 (MQ=255)
                                                                                                        ctcATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGtt                                               >  1:1976447/1‑150 (MQ=255)
                                                                                                          atttaccaagacaaataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTAt                                             >  1:3389322‑M2/44‑150 (MQ=255)
                                                                                                          atttaccaagacaaataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTAt                                             <  1:1675395‑M2/107‑1 (MQ=255)
                                                                                                            ttttCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTAttt                                           <  1:2271559/150‑1 (MQ=255)
                                                                                                            ttaccaagacaaataagtaagaaaaactctgacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTAttt                                           >  1:1129587‑M2/42‑150 (MQ=255)
                                                                                                              ttCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAGGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaa                                         >  1:587387/1‑150 (MQ=255)
                                                                                                              accaagacaaataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaa                                         <  1:353975‑M2/111‑1 (MQ=255)
                                                                                                              accaagacaaataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaa                                         >  1:1949768‑M2/40‑150 (MQ=255)
                                                                                                               tCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaac                                        <  1:3167288/150‑1 (MQ=255)
                                                                                                                cacaTTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTgc                                                            >  1:131698/1‑129 (MQ=255)
                                                                                                                cacaTTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTgc                                                            >  1:131705/1‑129 (MQ=255)
                                                                                                                cacaTTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTgc                                                            >  1:131699/1‑129 (MQ=255)
                                                                                                                cacaTTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaaca                                       <  1:181571/150‑1 (MQ=255)
                                                                                                                cacaTTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaaca                                       <  1:1385034/150‑1 (MQ=255)
                                                                                                                  caTTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaacaga                                     >  1:639844/1‑150 (MQ=255)
                                                                                                                  agacaaataagtaagaaaaactcatacacgctcatTGAATGAAATGGAAAACTTGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaacaga                                     <  1:4080507‑M2/115‑1 (MQ=255)
                                                                                                                    acaaataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTaacagaac                                   <  1:1766074‑M2/117‑1 (MQ=255)
                                                                                                                       aataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGt                                >  1:376813‑M2/31‑150 (MQ=255)
                                                                                                                       aataagtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGt                                >  1:376817‑M2/31‑150 (MQ=255)
                                                                                                                           gggTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCt                            <  1:3592766/150‑1 (MQ=255)
                                                                                                                            gtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCATTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTg                           <  1:671593‑M2/125‑1 (MQ=255)
                                                                                                                            gtaagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTg                           <  1:671592‑M2/125‑1 (MQ=255)
                                                                                                                              aagaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAATGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgt                         <  1:3246978‑M2/127‑1 (MQ=255)
                                                                                                                               agaaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgta                        >  1:905993‑M2/23‑150 (MQ=255)
                                                                                                                               aaTGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgta                        <  1:3063172/150‑1 (MQ=255)
                                                                                                                                gaaagactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgtag                       <  1:2730877‑M2/129‑1 (MQ=255)
                                                                                                                                gaaagactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgtag                       <  1:2730876‑M2/129‑1 (MQ=255)
                                                                                                                                 aaaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATATCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgtagt                      >  1:367381‑M2/21‑150 (MQ=255)
                                                                                                                                  gATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgtagta                     <  1:550179/150‑1 (MQ=255)
                                                                                                                                  aaagctcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGa                                                       <  1:2318163‑M2/97‑1 (MQ=255)
                                                                                                                                  aaaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGgtagta                     <  1:4032136‑M2/131‑1 (MQ=255)
                                                                                                                                  aaaactcagacacgctcatTGAATAAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGa                                                       <  1:2318162‑M2/97‑1 (MQ=255)
                                                                                                                                   aaactcagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTaa                    >  1:3881064‑M2/19‑150 (MQ=255)
                                                                                                                                    accccagacacgctcatTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTaac                   <  1:3036942‑M2/133‑1 (MQ=255)
                                                                                                                                     tCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTaaca                  <  1:1604284/150‑1 (MQ=255)
                                                                                                                                     tCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTaaca                  <  1:965914/150‑1 (MQ=255)
                                                                                                                                     tCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTaaca                  <  1:965915/150‑1 (MQ=255)
                                                                                                                                      cccAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTaacaa                 >  1:3909178/1‑150 (MQ=255)
                                                                                                                                      cccAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAATGCCGGGTAGTaacaa                 <  1:1378103/150‑1 (MQ=255)
                                                                                                                                         aGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACta              <  1:3833632/150‑1 (MQ=255)
                                                                                                                                            aaTCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATaa           <  1:187382/150‑1 (MQ=255)
                                                                                                                                             aTCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAAt          <  1:950029/150‑1 (MQ=255)
                                                                                                                                              tCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCCGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAAtt         >  1:1813209/1‑150 (MQ=255)
                                                                                                                                                  tATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTAcc     <  1:3470493/150‑1 (MQ=255)
                                                                                                                                                  tATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTAcc     <  1:3181549/150‑1 (MQ=255)
                                                                                                                                                  catTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTNGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGNACANTGCCTGGTAGTAACAACTATAATTTAcc     <  1:3723851‑M2/147‑1 (MQ=255)
                                                                                                                                                  catTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTAcc     <  1:1299112‑M2/147‑1 (MQ=255)
                                                                                                                                                  catTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTCGATTAGCGAAGAAGTGTGCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTAcc     <  1:3974086‑M2/147‑1 (MQ=255)
                                                                                                                                                     tgaatgaaATGGAAAACTGGCCAACGTATTATCCCTATCAGTTAAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAg  <  1:2202130/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGTAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCCCAGCAATCTTTATTGAATGAAATGGAAAACTGGCCAACGTATTATCCCTATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAGATGATGTCTCATTGATTTTTTTGCGCTGACTTCAGTTATTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAG  >  Xen14_7/136108‑136406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.