New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_117 = 7743 (0.480)34 (0.420) 27/292 2.3 32.5% intergenic (–/+1345) –/nleF –/Effector protein NleF
?Xen14_7 136257 = 99 (1.320)coding (569/651 nt) zinT Metal‑binding protein ZinT

‑‑‑‑‑‑‑‑‑‑TTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTAAAGCTAACCAGAAATATAG  >  Xen14_117/1‑224
                                                                                      |                                                                                                                                                   
acttcagttatttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGTGAACGATaaa                                                                                      <  1:3687083/140‑1 (MQ=255)
acttcagttatttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATaaa                                                                                      <  1:3687081/140‑1 (MQ=255)
 cttcagttatttAACAGAACAGTGCCTGGTAGTAACAACTATACTTTACCAAGACAAATAAGTAAGAAAAACTCAGACACACTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAACAAAACCAAGAAAAAGGCGAACGATAAAt                                                                                     >  1:2983882/10‑150 (MQ=21)
 cttcagttatttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTCTGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAAt                                                                                     >  1:3577986/10‑150 (MQ=255)
 cttcagttatttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAg                                                                                                                    >  1:903236/10‑119 (MQ=255)
 cttcagttatttAACAGAACAGTGCATGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTCTTATGTCTGTAGAAAAAAACCGAGAAAAAAGCGAACGATAAAt                                                                                     >  1:3416815/10‑150 (MQ=21)
   gcagttatttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGATACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATac                                                                                   <  1:1989140/143‑1 (MQ=255)
    cagttatttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTCTTATGTCTGTAg                                                                                                                    >  1:926260/7‑116 (MQ=255)
           ttAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTCTTATGTCTGTAGAAAAAAAACGAGAAAAAGGCGAACGATAAATa                                                                                    >  1:2415608/1‑141 (MQ=255)
             aacagaacagTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAAACGAGAAAAAGGCGAAAGATAAACACACAACTccgc                                                                         >  1:961500/1‑147 (MQ=25)
              acagaacagTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgacatggaaaactggccaacgtattatccctatcagttgagtagcgacgaagtggtcgaggagatgatgtct                                                                        >  1:3066668‑M1/1‑73 (MQ=255)
               cagaacagTGCCTGGTAGTAACAACGATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCta                                                                       <  1:576880/150‑1 (MQ=255)
                 gaacagTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCtata                                                                     <  1:2113446/150‑1 (MQ=255)
                  aacagTGCCTGGTAGTAACAACTATAATCTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATAc                                                                    <  1:24217/150‑1 (MQ=255)
                    cagTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAg                                                                  <  1:3336664/150‑1 (MQ=255)
                     agTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAAc                                                                                            <  1:2324921/123‑1 (MQ=255)
                        gCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttt                                                              >  1:1350740‑M1/1‑63 (MQ=255)
                        gCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTTGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTg                                                              >  1:288990/1‑150 (MQ=255)
                           tGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCa                                                           >  1:2302132/1‑150 (MQ=255)
                            ggTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTCTTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCCATACAGACTGGCAg                                                          >  1:3786637/1‑150 (MQ=255)
                            ggTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAg                                                          <  1:616755/150‑1 (MQ=255)
                                gtaACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACATGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCa                                                      <  1:3370775/150‑1 (MQ=255)
                                   acaacTATAGTTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATATAGACTGGCAGCGCAAAt                                                   <  1:3004661/150‑1 (MQ=255)
                                      acTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttc                                                >  1:2692887‑M1/1‑49 (MQ=255)
                                          taATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacctcagtt                                            <  1:1819803‑M1/150‑106 (MQ=255)
                                           aaTTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAg                                           <  1:1258349/150‑1 (MQ=255)
                                            aTTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttat                                          >  1:3389322‑M1/1‑43 (MQ=255)
                                            aTTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttat                                          <  1:1675395‑M1/150‑108 (MQ=255)
                                             tttACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTCTTACGTCTGTAGAAAAAAAACGAGAAAAAGGCGAACGATAAATACCCAACTCAGCTATACAGACTGGCCGCGCACATGTCTCCCGGa                                         >  1:3807255/1‑150 (MQ=38)
                                             tttACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCCAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGa                                         <  1:4237493/150‑1 (MQ=255)
                                             tttACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGAGAACAACAAACACACAACTCAGCTATACAGAATGGCAGCGCAAATGTCTCCAGGa                                         >  1:3807256/1‑150 (MQ=38)
                                              ttACCAAGACAAATAAGTAAGAAAAACTCTGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttattt                                        >  1:1129587‑M1/1‑41 (MQ=255)
                                              ttACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAagag                                        >  1:152349/1‑150 (MQ=255)
                                              ttACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAg                                        >  1:152352/1‑150 (MQ=255)
                                                aCCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaa                                      >  1:1949768‑M1/1‑39 (MQ=255)
                                                aCCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaa                                      <  1:353975‑M1/150‑112 (MQ=255)
                                                aCCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCa                                      <  1:1315191/150‑1 (MQ=255)
                                                aCCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCa                                      <  1:1312853/150‑1 (MQ=255)
                                                 ccAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACAATAAATCCACAACTCAGCTCTACAGACTGGCAGCGCAAATGTCTCCAGGAGCaa                                     >  1:3942603/1‑150 (MQ=255)
                                                    aGACAAATAAGTAAGAAAAACTCATACACGCTCATtgaatgaaatggaaaacttgccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacaga                                  <  1:4080507‑M1/150‑116 (MQ=255)
                                                    aGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTc                                  <  1:3497063/150‑1 (MQ=255)
                                                     gACAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtagaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaa                                 >  1:4089172‑M1/1‑34 (MQ=255)
                                                      aCAAATAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaac                                <  1:1766074‑M1/150‑118 (MQ=255)
                                                      aCAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCAt                                <  1:1578045/150‑1 (MQ=255)
                                                       cAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATc                               <  1:4256541/150‑1 (MQ=255)
                                                       cAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAACTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATc                               >  1:158373/1‑150 (MQ=255)
                                                         aaTAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagt                             >  1:376813‑M1/1‑30 (MQ=255)
                                                         aaTAAGTAAGAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagt                             >  1:376817‑M1/1‑30 (MQ=255)
                                                              gtaagAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcatttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctg                        <  1:671593‑M1/150‑126 (MQ=255)
                                                              gtaagAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaggtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctg                        >  1:3987884‑M1/1‑25 (MQ=255)
                                                              gtaagAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctg                        <  1:671592‑M1/150‑126 (MQ=255)
                                                               taagAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATgg                       <  1:829517/150‑1 (MQ=255)
                                                               taagAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATgg                       <  1:2885990/150‑1 (MQ=255)
                                                               taagAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATgg                       <  1:829514/150‑1 (MQ=255)
                                                                aagAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaatgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggt                      <  1:3246978‑M1/150‑128 (MQ=255)
                                                                aagAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGt                      <  1:3221559/150‑1 (MQ=255)
                                                                 agAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggta                     >  1:2158656‑M1/1‑22 (MQ=255)
                                                                 agAAAAACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggta                     >  1:905993‑M1/1‑22 (MQ=255)
                                                                  gAAAGACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtag                    <  1:2730877‑M1/150‑130 (MQ=255)
                                                                  gAAAGACTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtag                    <  1:2730876‑M1/150‑130 (MQ=255)
                                                                  gAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAACTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTaa                    >  1:3372934/1‑150 (MQ=255)
                                                                   aaaaaCTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatatctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagt                   >  1:367381‑M1/1‑20 (MQ=255)
                                                                    aaagctcagACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctga                                                    <  1:2318163‑M1/112‑98 (MQ=255)
                                                                    aaaaCTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagta                  <  1:4032136‑M1/150‑132 (MQ=255)
                                                                    aaaaCTCAGACACGCTCATtgaataaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctga                                                    <  1:2318162‑M1/116‑98 (MQ=255)
                                                                     aaaCTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaa                 >  1:3881064‑M1/1‑18 (MQ=255)
                                                                      accccagacACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaac                <  1:3036942‑M1/146‑134 (MQ=255)
                                                                       aCTCAGACACGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaaca               >  1:271351‑M1/1‑16 (MQ=255)
                                                                             acacGCTCATACTTGAGTCGTTTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTAAAGCTAACCAGa         <  1:2639744/150‑1 (MQ=255)
                                                                             acacGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTAAAGCTAACCAGa         <  1:2639745/150‑1 (MQ=255)
                                                                              cacGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaacaactataa        <  1:2304238‑M1/150‑142 (MQ=255)
                                                                               acGCTCATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaacaactataat       <  1:982605‑M1/150‑143 (MQ=255)
                                                                                 gCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTAAAGCTAACCAGAAata     <  1:7637/150‑1 (MQ=255)
                                                                                    cATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtngtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagnacantgcctggtagtaacaactataatttacc  <  1:3723851‑M1/150‑148 (MQ=255)
                                                                                    cATtgaatgaaatggaaaactggccaacgtattatccctatcagttgagtagcgaagaagtggtcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaacaactataatttacc  <  1:1299112‑M1/150‑148 (MQ=255)
                                                                                    cATtgaatgaaatggaaaactggccaacgtattatccctatcagtcgattagcgaagaagtgtgcgaggagatgatgtctcattgatttttttgcgctgacttcagttatttaacagaacagtgcctggtagtaacaactataatttacc  <  1:3974086‑M1/150‑148 (MQ=255)
                                                                                    cATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCCGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTAAAGCTAACCAGAAATATAg  >  1:3050860/1‑150 (MQ=255)
                                                                                      |                                                                                                                                                   
‑‑‑‑‑‑‑‑‑‑TTTAACAGAACAGTGCCTGGTAGTAACAACTATAATTTACCAAGACAAATAAGTAAGAAAAACTCAGACACGCTCATACTTGAGTCGTGTCTTTTTTATTATGTCTGTAGAAAAAAACCGAGAAAAAGGCGAACGATAAATACACAACTCAGCTATACAGACTGGCAGCGCAAATGTCTCCAGGAGCAAGTCATCTATCATGGTAAAGCTAACCAGAAATATAG  >  Xen14_117/1‑224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.