BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_159	= 729	33 (0.290)	52 (0.540)	31/296	2.0	46.6%	intergenic (+397/–)	Xen14_04769/–	hypothetical protein/–
*	?	Xen14_60	= 18896	86 (1.120)	52 (0.540)	31/296	2.0	46.6%	intergenic (+512/+385)	Xen14_04101/yeeW	hypothetical protein/Protein YeeW

Only 100 of 138 total aligned reads displayed.

TCTGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAATATCCTACCGTTGCT  >  Xen14_60/18749‑19042

tCTGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACtt                                                                                                                                                  >  1:29399/1‑150 (MQ=38)

  tGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTa                                                                                                                                                >  1:682439/1‑150 (MQ=39)

   gAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTaa                                                                                                                                               <  1:3726952/150‑1 (MQ=40)

       ggTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCg                                                                                                                                           >  1:2723760/1‑150 (MQ=255)

          aTCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaag                                                                                                                                        >  1:1146641‑M2/1‑138 (MQ=255)

          aTCGATCCGGAAGCGTATCTACGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaag                                                                                                                                        >  1:2985318‑M2/1‑138 (MQ=255)

            cGATCCGGAAGCGTATCTGCGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTCCcgataattaaagcc                                                                                                                                      <  1:3354380‑M2/150‑15 (MQ=255)

            cGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTc                                                                                                                                      >  1:1904341/1‑150 (MQ=255)

            cGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTc                                                                                                                                      >  1:2409311/1‑150 (MQ=255)

             gATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTaa                                                                                                                                               >  1:2821202/1‑140 (MQ=40)

             gATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCt                                                                                                                                     >  1:3414060/1‑150 (MQ=255)

                ccGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTaaattaaagtaagc                                                                                                                                   <  1:2425317/149‑13 (MQ=255)

                 cGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGc                                                                                                                                 >  1:59563/1‑150 (MQ=255)

                    aaGTGTATCTGCGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggt                                                                                                                              >  1:693747‑M2/1‑128 (MQ=255)

                         tATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGAttt                                                                                                                         >  1:3149922/1‑150 (MQ=255)

                         tATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGAttt                                                                                                                         >  1:2890113/1‑150 (MQ=255)

                         tATCTGCGCCACATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgt                                                                                                                         <  1:2067884‑M2/150‑28 (MQ=255)

                             tGCGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcag                                                                                                                     <  1:2389882‑M2/150‑32 (MQ=255)

                             tGCGCCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcag                                                                                                                     <  1:2389880‑M2/150‑32 (MQ=255)

                              gcgcCATATTCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcagg                                                                                                                    <  1:2479353‑M2/150‑33 (MQ=255)

                                 ccATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAATGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTc                                                                                                                 >  1:4391919/1‑150 (MQ=255)

                                 ccATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTc                                                                                                                 >  1:3654933/1‑150 (MQ=255)

                                      ttCTGAGCGTACTGCCGGAATGGCACTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatac                                                                                                            <  1:2553682‑M2/150‑41 (MQ=255)

                                      ttCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTAcc                                                                                                            >  1:1691716/1‑150 (MQ=255)

                                      ttCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTAcc                                                                                                            >  1:1691721/1‑150 (MQ=255)

                                       tCTGAGCGTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatact                                                                                                           <  1:179652‑M2/150‑42 (MQ=255)

                                            gcgtactGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaac                                                                                                      >  1:2280798‑M2/4‑104 (MQ=255)

                                            gcgtactGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaac                                                                                                      >  1:2280793‑M2/4‑104 (MQ=255)

                                              aTACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGt                                                                                                    >  1:2510495/1‑150 (MQ=255)

                                                 cTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaa                                                                                                       >  1:1409448‑M2/1‑99 (MQ=255)

                                                  tGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGAt                                                                                                >  1:4030775/1‑150 (MQ=255)

                                                  tGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaag                                                                                                <  1:1812589‑M2/150‑53 (MQ=255)

                                                  tGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaag                                                                                                <  1:2049992‑M2/150‑53 (MQ=255)

                                                  tGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaag                                                                                                <  1:2049993‑M2/150‑53 (MQ=255)

                                                   gCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATGAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagc                                                                                               <  1:1073333‑M2/150‑54 (MQ=255)

                                                   gCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagc                                                                                               <  1:1073330‑M2/150‑54 (MQ=255)

                                                    ccGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGAttt                                                                                              >  1:1409090/1‑150 (MQ=255)

                                                      ggAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGTACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTgg                                                                                            <  1:3568024/150‑1 (MQ=255)

                                                        aaTGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGaa                                                                                          <  1:2828178/150‑1 (MQ=255)

                                                           ggCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCTTCAATACGGTGCTCCTTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTc                                                                                       <  1:4151339/150‑1 (MQ=255)

                                                             cccTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCAt                                                                                     >  1:2599893/1‑150 (MQ=255)

                                                               cTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataacca                                                                                   <  1:53165‑M2/150‑66 (MQ=255)

                                                               cTCCAACCGTGTTGACGAACTCCTGCCATAGAACGTAGTACTCACCAATAAATACGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggttccgttcaagtcccatactcaaaccgaaagcactgaataacca                                                                                   <  1:3205327‑M2/150‑66 (MQ=255)

                                                                  cAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTCCTCAGACCATGGCTTTGGAATTCAtttttt                                                                                >  1:2756062/1‑150 (MQ=21)

                                                                  cAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCAtttttt                                                                                >  1:1893293/1‑150 (MQ=255)

                                                                  cAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCAtttttt                                                                                >  1:2756065/1‑150 (MQ=255)

                                                                  cAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagat                                                                                <  1:933651‑M2/150‑69 (MQ=255)

                                                                     ccGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGatgccgacggtggat                                                                             >  1:1676388/1‑136 (MQ=255)

                                                                     ccGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTc                                                                             <  1:2848025/150‑1 (MQ=255)

                                                                           tGACGAACTCCTGCCATGGAACGTAGTTCCCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTg                                                                               >  1:1028448/1‑142 (MQ=255)

                                                                           tGACGAACTCCTGCCATGGAACGTAGTTCCCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTg                                                                               >  1:2445293/1‑142 (MQ=255)

                                                                            gACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCT‑ACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAAt                                                                     <  1:734895/150‑1 (MQ=255)

                                                                              cGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAGTACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATg                                                                    <  1:821625/150‑1 (MQ=255)

                                                                               gAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGc                                                                   <  1:2903455/150‑1 (MQ=255)

                                                                                aaCTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCGCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCt                                                                  >  1:3954211/1‑150 (MQ=255)

                                                                                 aCTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTa                                                                 >  1:2511724/1‑150 (MQ=255)

                                                                                     cTGCCATGGAACGTAATTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCg                                                             >  1:1627525/1‑150 (MQ=255)

                                                                                         cATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTaa                                                         <  1:2675834/150‑1 (MQ=255)

                                                                                            ggAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGtt                                                           <  1:845092/145‑1 (MQ=255)

                                                                                            ggAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAAc                                                      <  1:2196657/150‑1 (MQ=255)

                                                                                             gAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTCTGTCAGGTCAATGCTAATCGTTAAAACg                                                     >  1:3414508/1‑150 (MQ=255)

                                                                                                cGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGcc                                                  <  1:138552/150‑1 (MQ=255)

                                                                                                cGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGcc                                                  <  1:138548/150‑1 (MQ=255)

                                                                                                cGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGcc                                                  <  1:3190862/150‑1 (MQ=255)

                                                                                                cGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCGTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGcc                                                  <  1:138553/150‑1 (MQ=255)

                                                                                                  tcgTTCTCACCAATAAATAAGCGTCAATACAGTGCTCCGTTGACGCTCACTTTACTCCGTTTTCTGAGCTTAGGTTTTTCTATTCCTACCCAGCCCATTGAGTTGGACTTCATTTTTTGTCCAGTCAATGCTCATCgctacaaactccat                                                >  1:2695619/3‑137 (MQ=16)

                                                                                                    gTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATaa                                              <  1:1196365/150‑1 (MQ=255)

                                                                                                    gTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCCTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATaa                                              >  1:1580371/1‑150 (MQ=255)

                                                                                                            cAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTc                                      >  1:4009425/1‑150 (MQ=255)

                                                                                                               taaataaGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCAc                                   >  1:1888417/1‑150 (MQ=255)

                                                                                                                  ataaGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttc                                >  1:481725‑M2/1‑34 (MQ=255)

                                                                                                                   taaGCGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttca                               >  1:1812320‑M2/1‑33 (MQ=255)

                                                                                                                    aaGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGaa                              >  1:4196485/1‑150 (MQ=255)

                                                                                                                     aGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAg                             <  1:3421475/150‑1 (MQ=255)

                                                                                                                     aGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAg                             <  1:3236410/150‑1 (MQ=255)

                                                                                                                     aGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAg                             <  1:1299588/150‑1 (MQ=255)

                                                                                                                     aGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAg                             <  1:3618531/150‑1 (MQ=255)

                                                                                                                     aGCGTCAATACGGTGCTCCGTCGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAg                             >  1:1322412/1‑150 (MQ=255)

                                                                                                                       cGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaattt                           >  1:3442507‑M2/1‑29 (MQ=255)

                                                                                                                       cGTCAATACGGTGCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaattt                           <  1:3118033‑M2/150‑122 (MQ=255)

                                                                                                                              aCGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAg                    >  1:2517216/1‑150 (MQ=255)

                                                                                                                              aCGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAg                    >  1:2517217/1‑150 (MQ=255)

                                                                                                                                ggTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTa                  >  1:3555289/1‑150 (MQ=255)

                                                                                                                                 gTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAGTCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTaa                 <  1:2971893/150‑1 (MQ=255)

                                                                                                                                   gCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaatta               >  1:1851397‑M2/1‑17 (MQ=255)

                                                                                                                                   gCTCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaatta               >  1:1851396‑M2/1‑17 (MQ=255)

                                                                                                                                    cTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAatat              <  1:1794326/150‑1 (MQ=255)

                                                                                                                                     tCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattgac             <  1:3876560‑M2/150‑136 (MQ=255)

                                                                                                                                     tCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatacaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaac             >  1:3870386‑M2/1‑15 (MQ=255)

                                                                                                                                     tCCGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatacaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaac             >  1:3219392‑M2/1‑15 (MQ=255)

                                                                                                                                      ccGTTGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaacg            >  1:270664‑M2/1‑14 (MQ=255)

                                                                                                                                       cGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAATATCCt           >  1:1594069/1‑150 (MQ=255)

                                                                                                                                         ttGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaacgctc         >  1:1330359‑M2/1‑11 (MQ=255)

                                                                                                                                         ttGACGCTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaacgctc         >  1:1334251‑M2/1‑11 (MQ=255)

                                                                                                                                          tGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAATATCCTAcc        <  1:3636741/150‑1 (MQ=255)

                                                                                                                                             cGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAATATCCTACCGtt     >  1:884482/1‑150 (MQ=255)

                                                                                                                                              gCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAATATCCTACCGTTg    <  1:1825928/150‑1 (MQ=255)

                                                                                                                                               cTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaacgctctatcgc   <  1:1291019‑M2/150‑146 (MQ=255)

                                                                                                                                               cTTACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaacgctctatcgc   <  1:1291015‑M2/150‑146 (MQ=255)

                                                                                                                                                ttACcgataattaaagccaccacggtcccgttcaggtcccatactcaaaccgaaagcactggataaccagattttaaggcgatgcaaatacgcagcctgaacagcctgattatattgttcaatttgatgttcaattaacgctctatcgcc  >  1:3267175‑M2/1‑4 (MQ=255)

TCTGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACTTTAATCCGTTTTCTGAGCTTAGATTTTTCTGTTCCTACCCAGACCGTGGATTTGGAATTCATTTTTTGTCAGGTCAATGCTAATCGTTAAAACGGCCATAACGCACCTCCACTGGAAGGTTTATCAGTAATATCCTACCGTTGCT  >  Xen14_60/18749‑19042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.