BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_12	= 189	78 (0.870)	54 (0.730)	27/294	1.5	41.1%	intergenic (–/+139)	–/Xen14_01540	–/hypothetical protein
*	?	Xen14_21	= 59	NA (NA)	54 (0.730)	27/294	1.5	41.1%	intergenic (–/+18)	–/add	–/Adenosine deaminase

Only 100 of 149 total aligned reads displayed.

CTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAGCCATCACGCAGT  >  Xen14_12/40‑336

cTGGCGAAACTGGTGCGATGGCATGACAGCAAACGCACCGGGCGCCCCGGTTGGGTATTCATGTGGGATGGATGGTTAAGACGTCAGGATGTGGTTGAGGGTTACCTGGGGATGAAATCGCTGGATCAGGAGATCTGATAAAGAGACAgg                                                                                                                                                     <  1:2644956/150‑1 (MQ=14)

cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGTTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                                     >  1:236852/1‑150 (MQ=255)

cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGCAGTCTCTTGATAAGGAGATCTGATCAAGAGACAgg                                                                                                                                                     >  1:2011847/1‑150 (MQ=255)

cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                                     <  1:2144488/150‑1 (MQ=255)

cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                                     <  1:1987165/150‑1 (MQ=255)

cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                                     >  1:2693708/1‑150 (MQ=255)

cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGGCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTATCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                                     <  1:29848/150‑1 (MQ=255)

  ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCGAGAGACAGGcc                                                                                                                                                   >  1:2802831/1‑149 (MQ=255)

  ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAggac                                                                                                                                                   >  1:64812/1‑148 (MQ=255)

   gCGAAATTGGGGCGAGGACAGGACAACAAACACACCGGTCGCCCCGGTTGGGTAGTCGTGTGGGATGGTTGGTTCAGACTTCAGGATGTGGTTGAGGGTTACTTGGTGATGAGTTCTCTTGATCAGGAGATCTGACCAAGAGACAgggca                                                                                                                                                  <  1:1475126/150‑4 (MQ=17)

   gCGAAACTGGGGCGATGGCATGACAACAAACACACCGGTCGCCCCGGTTGGGTAGTCGTGTGGGATGGCTGGTTCAGACTTCAGGATGTGGTTGAGGGTTACTTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgca                                                                                                                                                  <  1:1475123‑M1/150‑4 (MQ=255)

    cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCAtg                                                                                                                                                 <  1:1729940/150‑2 (MQ=255)

    cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATa                                                                                                                                                 >  1:250248/1‑150 (MQ=255)

    cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATa                                                                                                                                                 >  1:250247/1‑150 (MQ=255)

    cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATa                                                                                                                                                 >  1:250251/1‑150 (MQ=255)

     gAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATaa                                                                                                                                                <  1:2167069/150‑1 (MQ=255)

     gAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGACTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGggtac                                                                                                                                                >  1:1438076‑M1/1‑145 (MQ=255)

      aaaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAggttgcag                                                                                                                                               <  1:778807/150‑7 (MQ=255)

      aaaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAggttgcag                                                                                                                                               <  1:438736/150‑7 (MQ=255)

      aaaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATCAAGTCTCCTGATCAGGAGATCTGATCAAGAGACAGGggtaca                                                                                                                                               <  1:2230479‑M1/150‑7 (MQ=255)

      aaaCTGGGGCGATGGCAGGACAACAAACGCACTGGCCGCCCCGTTTGGGTATTCATGTGGGAGGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGggtaca                                                                                                                                               <  1:4014513‑M1/150‑7 (MQ=255)

       aaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGcgtgaag                                                                                                                                              >  1:3837524/1‑144 (MQ=255)

          tGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccgg                                                                                                                                           >  1:831291‑M1/1‑140 (MQ=255)

          tGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccgg                                                                                                                                           >  1:831292‑M1/1‑140 (MQ=255)

           ggggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccgga                                                                                                                                          >  1:3397‑M1/1‑139 (MQ=255)

           ggggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccgga                                                                                                                                          >  1:711687‑M1/1‑139 (MQ=255)

            gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGggtacagagaga                                                                                                                                         >  1:2829930‑M1/1‑138 (MQ=255)

            gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggag                                                                                                                                         <  1:1708083‑M1/150‑13 (MQ=255)

            gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAgggg                                                                                                                                         >  1:2135891/1‑150 (MQ=255)

            gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAgggg                                                                                                                                         <  1:2130914/150‑1 (MQ=255)

             ggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggagg                                                                                                                                        <  1:2022228‑M1/150‑14 (MQ=255)

             ggCGATGGCATGACAGCAAACGCACCGGTCGCACCGGTTGGGTAGTCATGTGGGATGGATGGTTCCGACTTCCGGATATGGTTGAGGGTTACCTAGTGACGAAGTCTCTTTATTGCGAGATCTGATCAAGAGACAAGCaagcgagaggga                                                                                                                                        >  1:3856994/1‑139 (MQ=17)

              gCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCGGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgccgagggggggca                                                                                                                                       >  1:293694‑M1/1‑136 (MQ=255)

              gCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCGGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGACCAAGAGACAGGgccgagggggggca                                                                                                                                       >  1:314001‑M1/1‑136 (MQ=255)

              gCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGccagtgagagggat                                                                                                                                       >  1:2996584/1‑137 (MQ=255)

              gCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGCCATGTGGGCTGGCTGGCTCAGACTTCAGGATATGGTTGATGGTTACCCGGTGATGACGTCTCTTGATCAAGAGATCTGATCAAGAGACAGGCATAAACAGGGGCa                                                                                                                                       >  1:4225018/1‑150 (MQ=18)

               cGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtt                                                                                                                                      >  1:871115‑M1/1‑135 (MQ=255)

               cGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagcaggaggtt                                                                                                                                      >  1:4067393‑M1/1‑135 (MQ=255)

                 atgacatgaCAACAAACACACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTGGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttt                                                                                                                                    <  1:1324639‑M1/146‑18 (MQ=255)

                 aTGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttt                                                                                                                                    <  1:1822305‑M1/150‑18 (MQ=255)

                 aTGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttt                                                                                                                                    <  1:1822304‑M1/150‑18 (MQ=255)

                 aTGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttt                                                                                                                                    <  1:1016365‑M1/150‑18 (MQ=255)

                 aTGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCa                                                                                                                                    <  1:3793822/150‑1 (MQ=255)

                   ggCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCCCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttc                                                                                                                                  >  1:766276‑M1/1‑131 (MQ=255)

                    gCATGACAGCAAACGCACCGTTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTAAGACTTCAGGATCTGGGTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATTGGATCAAGAGACAGGgcatagccggaggtttttca                                                                                                                                 <  1:1251751‑M1/150‑21 (MQ=255)

                    gCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttca                                                                                                                                 <  1:3188995‑M1/150‑21 (MQ=255)

                    acaTGACAGCAAACACACCGGTCACCCCGGTTGGTTATTCATGTGGGATGGTTGGTTCAGACTTCAGGATGTGGTTGGGGGTTACTTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttca                                                                                                                                 <  1:964718‑M1/149‑21 (MQ=255)

                       tGACAGCAAACGCACCGTTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaat                                                                                                                              <  1:326796‑M1/150‑24 (MQ=255)

                       tGACAGCAAACGCACCGGTCGCCCCGTTTGGGTAGTCATGTGGGGTGGCTGGTTCAGACTTCAGGAGGTGGTTGAGGGTTACCTGGTGATGAGTTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaat                                                                                                                              <  1:326794‑M1/150‑24 (MQ=255)

                       tGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCGTGTTGGATGGCTGGTTCAGACTTCAGGATGTGGTTGAGGGTTACCTGGTGATGAAGTCTCTGGATCAGGAGATCGGATCAAGAGACAGGgcatagccggaggtttttcaaat                                                                                                                              <  1:3692238‑M1/150‑24 (MQ=255)

                        gACAGCAAACGCACCGGTCGCCCAGGTTGGGTAGTCATGTGGGATGGCCAGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGACATACACAGGGGCATCAGctccga                                                                                                                             >  1:3158590/1‑147 (MQ=18)

                          cAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAggttgcaggaagg                                                                                                                                          >  1:4220461/1‑124 (MQ=255)

                                         tCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGATACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAANAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctct                                                                                                            <  1:3949138‑M1/150‑42 (MQ=255)

                                           gCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctctta                                                                                                          >  1:679865‑M1/1‑107 (MQ=255)

                                            ccccGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGATTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAAACGGGCCTGAACAATAc                                                                                                           >  1:2199505/1‑148 (MQ=255)

                                                 gTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATcccc                                                                                                    >  1:1006039/1‑150 (MQ=255)

                                                     ggTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgc                                                                                                <  1:344618‑M1/150‑54 (MQ=255)

                                                     gacaGTCATGTGGGATGGCTGGTTCAGACTTAAGGATATGATTGAGGGTTACCTGGTGATGAAGTATCTTGATCCGGGGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGTTCTGAACAGGGCCTGAACAATACGATCCCCATAc                                                                                                >  1:3732062/4‑150 (MQ=25)

                                                      gTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgcc                                                                                               >  1:2633655‑M1/1‑96 (MQ=255)

                                                       tAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATAGGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgccc                                                                                              <  1:3113889‑M1/150‑56 (MQ=255)

                                                        aGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATAcgcg                                                                                             <  1:2861991/150‑1 (MQ=255)

                                                        aGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATAcgcg                                                                                             <  1:1053323/150‑1 (MQ=255)

                                                         gTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgcccta                                                                                            <  1:62197‑M1/150‑58 (MQ=255)

                                                           cATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCgggg                                                                                          >  1:1979784/1‑150 (MQ=255)

                                                           cATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCgggg                                                                                          >  1:2366614/1‑150 (MQ=255)

                                                            aTGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGc                                                                                         <  1:1134633/150‑1 (MQ=255)

                                                              gtgGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCaatgtcgcgcaag                                                                                       >  1:2876411/1‑138 (MQ=255)

                                                               tgGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgccctaacaggc                                                                                      <  1:1524449‑M1/150‑64 (MQ=255)

                                                                gggATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgccctgacaggcg                                                                                     >  1:2319716‑M1/1‑86 (MQ=255)

                                                                gggATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAAtt                                                                                     >  1:2886882/1‑150 (MQ=255)

                                                                gggATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGG‑CATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAAttt                                                                                    <  1:3788593/150‑1 (MQ=255)

                                                                  gATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgccctaacaggcgca                                                                                   <  1:2820569‑M1/150‑67 (MQ=255)

                                                                    tGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATCAACAGGGGCATCAGCTCTGAACCGGGCATGAACAATACGATCCCCATACGCGGGGCAATTTCAg                                                                                 >  1:3885962/1‑150 (MQ=255)

                                                                      gCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAggg                                                                               <  1:4205404/150‑1 (MQ=255)

                                                                       cTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAgggg                                                                              >  1:3095817/1‑150 (MQ=255)

                                                                                 ctgcAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATCTCAGGGGTCAGTAGTGc                                                                    <  1:1174335/147‑1 (MQ=255)

                                                                                             gTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCAc                                                        >  1:1428029/1‑150 (MQ=255)

                                                                                             gTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGAGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCAc                                                        >  1:755496/1‑150 (MQ=255)

                                                                                             gTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGAGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCAc                                                        >  1:755492/1‑150 (MQ=255)

                                                                                             gTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCACATACGCGGGGCAAGTTCAGGGGTCAGTAGTGCTCTCACGGTCAc                                                        >  1:3394486/1‑150 (MQ=255)

                                                                                                        ccTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACg                                             <  1:459972/150‑1 (MQ=255)

                                                                                                           ggTGACGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTa                                          >  1:3705259/1‑150 (MQ=255)

                                                                                                             tgatgaAGTCTCTTGATCAGGAGATCTGATCGAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTAtt                                        <  1:3060170/150‑1 (MQ=255)

                                                                                                               atgaAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACACGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGc                                      >  1:3551427/1‑150 (MQ=255)

                                                                                                                    gTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGaa                                 <  1:32476/150‑1 (MQ=255)

                                                                                                                      ctctTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGTGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCTTGAACg                               <  1:3806718/150‑1 (MQ=255)

                                                                                                                      ctctTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACg                               <  1:3727068/150‑1 (MQ=255)

                                                                                                                       tctTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGc                              >  1:3131631/1‑150 (MQ=255)

                                                                                                                       tctTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGACATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGc                              <  1:3647616/150‑1 (MQ=255)

                                                                                                                       tctTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGACATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGc                              <  1:3647615/150‑1 (MQ=255)

                                                                                                                           gATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCagaa                          >  1:3657081/1‑150 (MQ=255)

                                                                                                                            aTCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCagaag                         <  1:2332542/150‑1 (MQ=255)

                                                                                                                               aGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGaaa                      >  1:265744/1‑150 (MQ=255)

                                                                                                                                      cTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCATGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCa               <  1:4139951/150‑1 (MQ=255)

                                                                                                                                      cTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCa               >  1:3253377/1‑150 (MQ=255)

                                                                                                                                       tGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAg              <  1:3676470/150‑1 (MQ=255)

                                                                                                                                        gATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAGc             >  1:377867/1‑150 (MQ=255)

                                                                                                                                                gaCAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCTGCCATCACGc     >  1:1532717/1‑150 (MQ=255)

                                                                                                                                                  cAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCCGGGGTCAGTAGTGCTCTCCCGGTCACCTCAGCGAACGGTATTGCATGAACACAGAAGAAAAAAATCAACCATCAcacca   >  1:4037343/1‑146 (MQ=255)

                                                                                                                                                  cAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAGCCATCACGCAg   >  1:4196126/1‑150 (MQ=255)

CTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAGCCATCACGCAGT  >  Xen14_12/40‑336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.