| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_155 | = 77 | 26 (0.530) | 18 (0.320) +CCTTCGGTTTTCATCAGTCCTGATAACA |
14/240 | 1.0 | 63.1% | intergenic (–/+72) | –/Xen14_04767 | –/hypothetical protein |
| ? | Xen14_198 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_155/34‑77‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGTGCCCTCAG > Xen14_198/1‑141 |||||||||||||||||||||||||||| AGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAAC > 1:1410028/1‑150AGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCATTTTTATACATAAC > 1:1410027/1‑150 TTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGC < 1:1524178/150‑1 TTGATGAAATTGATGGGCTACAGCAATTCTGGTGATGACTGGCCTGCGGTTTGCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGC < 1:1524177/150‑1 ATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATATATAACGCCAT > 1:1386888/1‑150 ATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCAT > 1:1386887/1‑150 TGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGC > 1:512094/1‑150 GATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCA > 1:2907833/1‑150 ATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCAC < 1:556992/150‑1 GTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTT > 1:674739/1‑150 CAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGT > 1:1085271/1‑150 CAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGT > 1:3377029/1‑150 CAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATT < 1:557418/150‑1 AATTCTGGTGATGACTGGCCTTCGGTTTTCCTCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTC > 1:3795933/1‑150 TGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCTTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAATGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTG > 1:2644901/1‑150 TGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTG < 1:3029197/150‑1 GATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGC < 1:1077633/150‑1 GACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACACAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTC > 1:3284736/1‑150 CCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACATGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTTTTGA > 1:3708708/1‑150 CTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGAT > 1:1197050/1‑150 TTCGGTTTTCATCATTCCGGATAACAGGGCGCATAATTCGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATT < 1:3470119/150‑1 TCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTT < 1:2855411/150‑1 GTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTAT > 1:2461766/1‑150 GTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTAT > 1:1243281/1‑150 CATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGT < 1:2183454/150‑1 CATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTGTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGT < 1:2183453/150‑1 CAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGTGCC > 1:415311/1‑150 CAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGTGCC > 1:2540232/1‑150 CTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCACAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGTGCCCTCAG > 1:1882209/1‑150 CTGATAACAGTGCGCATAATGTGACACGCGTTATGTTAAAAAGGCCGCTGCGATACTTTCCACCACAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTAATTTTATTGTGTGCCCTCAG > 1:1882208/1‑150 |||||||||||||||||||||||||||| AGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_155/34‑77‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAACGCCATTGTGCGCACTGTTGTGTATTCAGTCGTTGCTTCTGTTGATTTTATTGTGTGCCCTCAG > Xen14_198/1‑141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |