New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_124 = 25760 (0.000)59 (0.790)
+CCTTCGGTTTTCATCAGTCCTGATAACA
30/240 0.4 100% intergenic (+232/–) sctC_2/– Type 3 secretion system secretin/–
?Xen14_21 74761 = NA (NA)intergenic (+146/–) hipA/– Serine/threonine‑protein kinase toxin HipA/–

GCAGCAGGAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_124/2430‑2576
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAA  >  Xen14_21/74761‑74837
                                                                                                                                                   ||||||||||||||||||||||||||||                                                                             
GCAGCAGGAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCT                                                                                                        >  1:1446719/1‑150
     AGGAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTC                                                                                                      <  1:1944626/147‑1
       GAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTT                                                                                                 <  1:2110074/150‑1
       GAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTT                                                                                                 <  1:3663759/150‑1
       GAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTT                                                                                                 <  1:2758334/150‑1
         GACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTC                                                                                               >  1:2747344/1‑150
         GACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTC                                                                                               >  1:2747348/1‑150
         GACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGACGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTC                                                                                               >  1:1029156/1‑150
          ACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCA                                                                                              <  1:2221529/150‑1
          ACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCA                                                                                              <  1:1838172/150‑1
            AGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACTGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATC                                                                                            <  1:2441309/150‑1
            AGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATC                                                                                            >  1:601367/1‑150
            AGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATC                                                                                            >  1:601364/1‑150
             GCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCA                                                                                           >  1:2107695/1‑150
             GCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCA                                                                                           >  1:807756/1‑150
             GCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATCGATGTGGCCAGTTGATGGAATTGGTGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCA                                                                                           >  1:3060882/1‑150
              CGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAG                                                                                          >  1:1895223/1‑150
              CGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAG                                                                                          >  1:3560046/1‑150
              CGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAG                                                                                          >  1:1738102/1‑150
              CGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGAAAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAG                                                                                          >  1:1738097/1‑150
                CAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTC                                                                                        >  1:1783387/1‑150
                CAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTC                                                                                        >  1:952056/1‑150
                CAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTC                                                                                        >  1:952054/1‑150
                          CCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAG                                                                              >  1:3724257/1‑150
                           CTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGACCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGT                                                                             >  1:2768339/1‑150
                            TGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTG                                                                            <  1:1111638/150‑1
                               CAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGC                                                                         >  1:242950/1‑150
                                AGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTAGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCGGTCCTGATAACAGTGCGCA                                                                        <  1:2698649/150‑1
                                  GCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATA                                                                      <  1:1895391/150‑1
                                   CCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAA                                                                     <  1:1158848/150‑1
                                   CCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAA                                                                     >  1:298841/1‑150
                                   CCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAA                                                                     >  1:298842/1‑150
                                   CCGCTATTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCGGTCCTGATAACAGTGCGCATAA                                                                     >  1:266616/1‑150
                                   CCGCTATTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAA                                                                     >  1:1680413/1‑150
                                   CCGCTATTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAA                                                                     >  1:1680412/1‑150
                                   CCGCTATTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGACAACAGTGCGCATAA                                                                     >  1:266614/1‑150
                                    CGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAAT                                                                    <  1:2428910/150‑1
                                    CGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGACGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTCTTCATCAGTCCTGATAACAGTGCGCATAAT                                                                    <  1:2428904/150‑1
                                     GCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATG                                                                   >  1:3603538/1‑150
                                     GCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATG                                                                   >  1:1675049/1‑150
                                     GCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATG                                                                   >  1:1675050/1‑150
                                     GCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATG                                                                   >  1:1675054/1‑150
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAACTTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGT                                                                  >  1:1037929/1‑150
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGT                                                                  >  1:1226278/1‑150
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGT                                                                  >  1:1138028/1‑150
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGAT                                                                                   >  1:2359196/1‑133
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGT                                                                  >  1:1037930/1‑150
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGT                                                                  >  1:1037932/1‑150
                                      CTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGT                                                                  >  1:340047/1‑150
                                       TTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTa                                                                 <  1:769188/150‑2
                                       TTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTa                                                                 <  1:769187/150‑2
                                       TTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTa                                                                 <  1:1177569/150‑2
                                         TTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGAC                                                               >  1:2079953/1‑150
                                         TTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGAC                                                               >  1:2079957/1‑150
                                         TTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGATTTTCATCAGTCCTGATAACAGTGCGCATAATGTGAC                                                               >  1:2079952/1‑150
                                            AAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatatta                                                            >  1:2504574/1‑144
                                            AAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatatta                                                            >  1:833180/1‑144
                                             AGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatattat                                                           >  1:1738477/1‑143
                                             AGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatattat                                                           >  1:1738478/1‑143
                                             AGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatattat                                                           >  1:2924215/1‑143
                                               GGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatattatgt                                                         <  1:105306/150‑10
                                               GGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGT                                                         <  1:3395079/150‑1
                                               GGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGT                                                         <  1:1548891/150‑1
                                                 CAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATA                                                                                  >  1:869141/1‑123
                                                  AGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGTCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTatattatgttaa                                                      >  1:3755178/1‑138
                                                      attGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTG                                                  >  1:385422/4‑150
                                                      ATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTG                                                  >  1:1269248/1‑150
                                                      ATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTG                                                  >  1:1269250/1‑150
                                                       TCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGA                                                 >  1:3276857/1‑150
                                                        CGAGACGAACGACGCAAGGCGTGATTCGTCCATGCATTGATGTGGCCAGTTGATAAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAA                                                <  1:3595349/150‑1
                                                         GAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAA                                               <  1:2075078/150‑1
                                                               AACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGTGCATGATGTGACACACGTTATGTTGAAAAaggag                                         >  1:161127/1‑145
                                                                ACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATTGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGC                                        <  1:2510785/150‑1
                                                                  GACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTG                                      <  1:2744377/150‑1
                                                                          GCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTT                              <  1:2071228/150‑1
                                                                                  CGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTTCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGC                      >  1:947974/1‑150
                                                                                  CGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAACAGGCCGCTGCGATACTTTCCACCGC                      <  1:2510660/150‑1
                                                                                  CGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGC                      <  1:3627684/150‑1
                                                                                         GCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCC               <  1:3262517/150‑1
                                                                                                 GTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATA       >  1:3446736/1‑150
                                                                                                  TGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAA                                              >  1:1096940/1‑110
                                                                                                  TGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAA                                              >  1:1096946/1‑110
                                                                                                      CAGTTGATGAAATTGACCGGTTACAGCAATTCTGGTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAA  <  1:1493424/150‑1
                                                                                                                                        GTGATGACTGGCCTTCGGTTTTCATCAGTCCTGATAACAGTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTT            <  1:3059159/106‑1
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GCAGCAGGAGACAGCGCAACGCGCTTCCTGCCAGGCCGCTTTTAAAGGGCAGCTATCGAGACGAACGACGCAAGGCGTGAGTCGTCCATGCATTGATGTGGCCAGTTGATGAAATTGATGGGTTACAGCAATTCTGGTGATGACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_124/2430‑2576
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGCGCATAATGTGACACGCGTTATGTTGAAAAGGCCGCTGCGATACTTTCCACCGCAGCGGCCTTTTTATACATAA  >  Xen14_21/74761‑74837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.