Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	24797	25087	291	2 [1]	[1] 2	r1tp42	ORF42

TTAGTACCTGCAATTACAACTGGTATTACTACAATGATGGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTAAAAATGTGGAATTCAATTCAACC  >  NC_004302/25052‑25158                                     |                                                                       ttAGTACCTGCAATTACAACTGGTATTACTACAATGATGGGTATTATAGGACCATCAATAGATATTTTaaacatc                                  <  1:2918805/75‑7 (MQ=255)                                 agaaatgGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTAAAAATGTGGAATTCAATTCAAcc  >  1:8655094/5‑75 (MQ=255)                                     |                                                                       TTAGTACCTGCAATTACAACTGGTATTACTACAATGATGGGTATTATAGGACCATCAATAGATACTTTAGTAAATTCATTCGTAAAAATGTGGAATTCAATTCAACC  >  NC_004302/25052‑25158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑