Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	24797	25087	291	2 [1]	[1] 2	r1tp42	ORF42

TTACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTATTGTCTCAGGCTTAAAACCAGTTTTTGATAGT  >  NC_004302/24726‑24811                                                                       |                ttACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTATTGTCTCAGGCTTaaaaatca             <  1:9149752/75‑5 (MQ=255)            ttCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTATTGTCTCAGGCTTAAAACCAGTTTTTgcaata  <  1:10185242/75‑6 (MQ=255)                                                                       |                TTACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTATTGTCTCAGGCTTAAAACCAGTTTTTGATAGT  >  NC_004302/24726‑24811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑