Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	24673	24716	44	2 [1]	[0] 2	r1tp42	ORF42

TCTCTGACTTTACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTATTGTCTCAGGCT  >  NC_004302/24717‑24791 |                                                                           tctcTGACTTTACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTACTGtcagacatg  <  1:11670487/75‑8 (MQ=255) tctcTGACTTTACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTACTGtcagacatg  <  1:7544681/75‑8 (MQ=255) |                                                                           TCTCTGACTTTACTGCAAAGTTCAGCTCGATATTATCACCCCTACAAGGAAGCTTTCAAACTATTGTCTCAGGCT  >  NC_004302/24717‑24791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑