Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	24673	24716	44	2 [1]	[0] 2	r1tp42	ORF42

CATTCCGATGGTAGGAAATATCTTTAAGGCTTTACCAGGAGCAATTTCGACGTTTGTGAGTGCAGCCGGAAAAGA  >  NC_004302/24604‑24678                                                                     |       cATTGCGATGGTAGGAAATATCTTTAAGGCTTTACCAGGAGCAATTTCGACGTTTGTGAGTGCAGCCGGcaaact  <  1:1902750/75‑3 (MQ=255) cATTCCGATGGTAGGAAATATCTTTAAGGCTTTACCAGGAGCAATTTCGACGTTTGTGAGTGCAGCCggtactta  <  1:8809717/75‑7 (MQ=255)                                                                     |       CATTCCGATGGTAGGAAATATCTTTAAGGCTTTACCAGGAGCAATTTCGACGTTTGTGAGTGCAGCCGGAAAAGA  >  NC_004302/24604‑24678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑