Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	31351	31371	21	2 [1]	[0] 2	r1tp47	ORF47

TTGATACTGCTCTAGCTGATACTGATAGCGTTACTGTTAGACAATCATCAGGCATATCAGGACTTGTGTATTCTA  >  NC_004302/31372‑31446 |                                                                           ttGATACTGCTCTAGCTGATACTGATAGCGTTACTGTTAGACAATCATCAGGCATATCAGGACTTctgtgtccct  <  1:3722640/75‑7 (MQ=255) ttGATACTGCTCTAGCTGATACTGATAGCGTTACTGTTAGACAATCATCAGGCATATCAGGACTTctgtgtccct  <  1:4627259/75‑7 (MQ=255) |                                                                           TTGATACTGCTCTAGCTGATACTGATAGCGTTACTGTTAGACAATCATCAGGCATATCAGGACTTGTGTATTCTA  >  NC_004302/31372‑31446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑