Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	31241	31282	42	2 [1]	[1] 2	r1tp47	ORF47

ACAACACAATTATTAGTCAGGCTAATTATATTACTAAACAAAGTGATTTAGGTAAAACGATTCGTATAAGCGCTCCAATACAAA  >  NC_004302/31267‑31350                 |                                                                    acaacaCAATTATTAGTCAGGCTAATTATATTACTAAACAAAGTGATTTAGGTAAAACGATTCGTATaatggaca           <  1:2247198/75‑7 (MQ=255)          tagatattCAGGCTAATTATATTACTAAACAAAGTGATTTAGGTAAAACGATTCGTATAAGCGCTCCAATACaaa  >  1:6718201/8‑75 (MQ=255)                 |                                                                    ACAACACAATTATTAGTCAGGCTAATTATATTACTAAACAAAGTGATTTAGGTAAAACGATTCGTATAAGCGCTCCAATACAAA  >  NC_004302/31267‑31350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑