Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	28473	28486	14	2 [1]	[1] 2	r1tp45	Structural protein

ATAAAGGTGG‑ATTGCGTGTACGCTCTGCTCAGGACGGAATGAATATTCAAGTAGGAAGCGGTTCAGCCGTAATTGAA  >  NC_004302/28482‑28558      |                                                                         taaagggTGGAATTGCGTGTACGCTCTGCTCAGGACGGAATGAATATTCAAGTAGGAAGCGGTTCAGCCGTAAtt     >  1:4357083/6‑75 (MQ=255)   aaaGGTGG‑ATTGCGTGTACGCTCTGCTCAGGACGGAATGAATATTCAAGTAGGAAGCGGTTCAGCCGTaacgttc  <  1:2066428/75‑6 (MQ=255)      |                                                                         ATAAAGGTGG‑ATTGCGTGTACGCTCTGCTCAGGACGGAATGAATATTCAAGTAGGAAGCGGTTCAGCCGTAATTGAA  >  NC_004302/28482‑28558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑