Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_004302 11744 12304 561 2 [1] [1] 2 r1tp22 ORF22

CAGAGATAAATGTTATCCCTCACAGCAAAGATGCAATGGAATTTTTAGGGATTCATGAATGGACGGAACAGGCAATTGAACATATTGAAAGTAAATTTCCTGACTGGATTCCACTCACAG  >  NC_004302/12254‑12373
                                                   |                                                                    
atcactgaaaTGTTATCCCTCACAGCAAAGATGCAATGGAATTTTTAGGGATTCATGAATGGACGGAACAGACaa                                               >  1:23643/8‑75 (MQ=255)
                                             tccatgttCATGAATGGACGGAACAGGCAATTGAACATATTGAAAGTAAATTTCCTGACTGGATTCCACTCACag  >  1:5519766/7‑75 (MQ=255)
                                                   |                                                                    
CAGAGATAAATGTTATCCCTCACAGCAAAGATGCAATGGAATTTTTAGGGATTCATGAATGGACGGAACAGGCAATTGAACATATTGAAAGTAAATTTCCTGACTGGATTCCACTCACAG  >  NC_004302/12254‑12373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑