Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	11744	12304	561	2 [1]	[1] 2	r1tp22	ORF22

GGAGAGATAG‑AAATCCCAACGTAGCTAGACAAGCACTCGCAGCGATTGGAGGGGATAGATGACAATTACTGAGCAGCAATTCTATGACATGCTCAATGTTGATGAACATATGAATTTC  >  NC_004302/11670‑11787                                                                           |                                             aaatggaTAGAAAATCCCAACGTAGCTAGACAAGCACTCGCAGCGATTGGAGGGGATAGATGACAATTACTGagc                                              >  1:6654904/6‑75 (MQ=255)                                             accaggAGTGGATAGATGACAATTACTGAGCAGCAATTCTATGACATGCTCAATGTTGATGAACATATGAAtctc  >  1:4841581/5‑72 (MQ=255)                                                                           |                                             GGAGAGATAG‑AAATCCCAACGTAGCTAGACAAGCACTCGCAGCGATTGGAGGGGATAGATGACAATTACTGAGCAGCAATTCTATGACATGCTCAATGTTGATGAACATATGAATTTC  >  NC_004302/11670‑11787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑