Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	28181	28188	8	2 [0]	[1] 2	r1tp44	ORF44

AGTCGTGGAA‑TTGAAAAACTTGCAGAACAAGAAGAAGTGCTCACGATAAATGGAGATATCGATTTAGAAAGTGA  >  NC_004302/28107‑28180                                                                           | atgggTGGAATTTGAAAAACTTGTAGAACAAGAAGAAGTGCTCACGATAAATGGAGATATCGATTTAGAAAGTGa  >  1:3793861/5‑75 (MQ=255) atgggTGGAATTTGAAAAACTTGTAGAACAAGAAGAAGTGCTCACGATAAATGGAGATATCGATTTAGAAAGTGa  >  1:3928959/5‑75 (MQ=255)                                                                           | AGTCGTGGAA‑TTGAAAAACTTGCAGAACAAGAAGAAGTGCTCACGATAAATGGAGATATCGATTTAGAAAGTGA  >  NC_004302/28107‑28180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑