Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_004302	19502	19536	35	3 [1]	[0] 2	r1tp31	Structural protein

TAGGTACAGCATCGGCTGTTATTGGGACAAATCACTTTGACTCTAAAGTTACGCAAAAAGTTGAAGCTCCAAGAGGCATTGCAGATCCCAACGGCG  >  NC_004302/19427‑19522                                                                           |                      tttacgaaGCATCGGCTGTTATTGGGACAAATCACTTTGACTCTAAAGTTACGCAAAAAGTTGAAGCTCCAagag                       >  1:4970010/8‑75 (MQ=255) tttacgaaGCATCGGCTGTTATTGGGACAAATCACTTTGACTCTAAAGATACGCAAAAAGTTGAAGCTCCAagag                       >  1:277248/8‑75 (MQ=255)                      gtccttaaaaTCACTTTGACTCTAAAGTTACGCAAAAAGTTGAAGCTCCAAGAGGCATTGCAGATCCCAACGgcg  >  1:839537/8‑75 (MQ=255)                                                                           |                      TAGGTACAGCATCGGCTGTTATTGGGACAAATCACTTTGACTCTAAAGTTACGCAAAAAGTTGAAGCTCCAAGAGGCATTGCAGATCCCAACGGCG  >  NC_004302/19427‑19522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑