Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1943375	1943390	16	1 [0]	[0] 1	SAUSA300_RS09620	serine protease SplA

CTTTACTCGAATGATGTGCTGATACTCTATTTTTAAAAATATCATTACTTTTAGCGATATGTTTGTTAGTTACGATTGTATTTTTACCAACAACTACACC  >  NC_007793/1943391‑1943490 |                                                                                                    ctttacTCGAATGATGTGCTGATACTCTATTTTTAAAAATATCATTACTCTTAGCGATATGTTTGTTAGTTACGATTGTATTTTTACCAACAACTACAcc  <  1:4875311/100‑1 (MQ=255) |                                                                                                    CTTTACTCGAATGATGTGCTGATACTCTATTTTTAAAAATATCATTACTTTTAGCGATATGTTTGTTAGTTACGATTGTATTTTTACCAACAACTACACC  >  NC_007793/1943391‑1943490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑