Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1943375	1943390	16	1 [0]	[0] 1	SAUSA300_RS09620	serine protease SplA

TTCTTATTAAAATTCAAACCTTCTGTACTTGTTTCATGAACATGAACTATCGCAAGGTCTTCTTTTCCGGGATATTCTACAATGTCTTTAACGTCGTAGT  >  NC_007793/1943276‑1943375                                                                                                   |  ttCTTATTAAAATTCAAACCTTCTGTACTTGTTTCATGAACATGAACTATCGCAAGGTCTTCTTTTCCGGGATATTCTACAATGTCTTTAACGTCGTAgg  <  1:5599031/100‑2 (MQ=255)                                                                                                   |  TTCTTATTAAAATTCAAACCTTCTGTACTTGTTTCATGAACATGAACTATCGCAAGGTCTTCTTTTCCGGGATATTCTACAATGTCTTTAACGTCGTAGT  >  NC_007793/1943276‑1943375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑