Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1553550	1553569	20	1 [0]	[0] 1	SAUSA300_RS07580	minor structural protein

CTGTTTCTAAATCGAAAGCCGTTAAATAGTTTCTATTATTTGGATTACTGTCTCCTGTATACCAATACAAGTATTTTTCATCAAAAGTCACACCCTGCAT  >  NC_007793/1553570‑1553669 |                                                                                                    cTGTCTCTAAATCGAAAGCCGTTAAATAGTTTCTATTATTTGGATTACTGTCTCCTGTATACCAATACAAGTATTTTTCATCAAAAGTCACACCCTGcta  <  1:647524/100‑3 (MQ=255) |                                                                                                    CTGTTTCTAAATCGAAAGCCGTTAAATAGTTTCTATTATTTGGATTACTGTCTCCTGTATACCAATACAAGTATTTTTCATCAAAAGTCACACCCTGCAT  >  NC_007793/1553570‑1553669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑