Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1553550	1553569	20	1 [0]	[0] 1	SAUSA300_RS07580	minor structural protein

AAGCTTTTTTACCACTATCTTTGTCATAGTATATTTGCAAACCTTCTGCTTCCGCAAATTCGCCAGGAAATGAATCTAGTGTTCCACCATAGTCAGCATT  >  NC_007793/1553450‑1553549                                                                                                    | aaGCTTTTTTACCACTATCTTTGTCATAGTATATTTGCAAACCTTCTGCTTCCGCAAATTCGCCAGGAAATGAACCTAGCGTTCCACCGTAGTCAGCAtt  <  1:1679886/100‑1 (MQ=255)                                                                                                    | AAGCTTTTTTACCACTATCTTTGTCATAGTATATTTGCAAACCTTCTGCTTCCGCAAATTCGCCAGGAAATGAATCTAGTGTTCCACCATAGTCAGCATT  >  NC_007793/1553450‑1553549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑