| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | NC_007793 | 512,783 | Δ5,436 bp | between repeat_region | SAUSA300_RS02440–SAUSA300_RS02450 | SAUSA300_RS02440, SAUSA300_RS02445, SAUSA300_RS02450 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007793 | 515151–517718 | 518264 | 547–3114 | 2 [0] | [0] 1 | [SAUSA300_RS02445]–SAUSA300_RS02450 | [SAUSA300_RS02445], SAUSA300_RS02450 |
TAGTAGCGGCGAGCGAAATGGGAAGAGCCCAAACCAACAAGCTTGCTTGTTGGGGTTGTAGGACACTCTATACGGAGTTACAAAGGACGACATTAGACGA > NC_007793/515051‑515150 |tagtagCGGCGAGCGAAATGGGAAGAGCCCAAACCAACAAGCTTGCTTGTTGGGGTTGTAGGACACTCTATACGGAGTTACAAAGGACGACATTAGACGa > 1:2578915/1‑100 (MQ=32)tagtagCGGCGAGCGAAATGGGAAGAGCCCAAACCAACAAGCTTACTTGTTGGGGTTGTAGGACACTCTATACGGAGTTACAAAGGACGACATTAGACGa > 1:4335805/1‑100 (MQ=18) |TAGTAGCGGCGAGCGAAATGGGAAGAGCCCAAACCAACAAGCTTGCTTGTTGGGGTTGTAGGACACTCTATACGGAGTTACAAAGGACGACATTAGACGA > NC_007793/515051‑515150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |