Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1600410	1600410	1	1 [0]	[0] 4	SAUSA300_RS07895/SAUSA300_RS07900	hypothetical protein/tyrosine recombinase XerD

TGTGACTTTTGAGTTATTGTTCACTTTATGCTCTAGGATGAAATTGGTTATACATTTTTCTAATTTGAGATTTCGAAACATGTGTATAGAGTTGGGTAGT  >  NC_007793/1600411‑1600510 |                                                                                                    tgtgACTTTTGAGTTATTGTTCACTTTATGCTCTAGGATGAAATTGGTTATACATTTTTCTAATTTGAGATTTCGAAACATGTGTATAGAGTTGGgtagt  <  1:3269096/100‑1 (MQ=255) tgtgACTTTTGAGTTATTGTTCACTTTATGCTCTAGGATGAAATTGGTTATACATTTTTCTAATTTGAGATTTCGAAACATGTGTATAGAGTTGGgtagt  <  1:4017386/100‑1 (MQ=255) tgtgACTTTTGAGTTATTGTTCACTTTATGCTCTAGGATGAAATTGGTTATACATTTTTCTAATTTGAGATTTCGAAACATGTGTATAGAGTTGGgtagt  <  1:4488813/100‑1 (MQ=255) tgtgACTTTTGAGTTATTGTTCACTTTATGCTCTAGGATGAAATTGGTTATACATTTTTCTAATTTGAGATTTCGAAACATGTGTATAGAGTTGGgtagt  <  1:5080424/100‑1 (MQ=255) |                                                                                                    TGTGACTTTTGAGTTATTGTTCACTTTATGCTCTAGGATGAAATTGGTTATACATTTTTCTAATTTGAGATTTCGAAACATGTGTATAGAGTTGGGTAGT  >  NC_007793/1600411‑1600510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑