Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1600410	1600410	1	1 [0]	[0] 4	SAUSA300_RS07895/SAUSA300_RS07900	hypothetical protein/tyrosine recombinase XerD

TGCAGCAAAAGAAGAAGCGATTCAATTAAGAAAACATAGACGTAATTAATCAACCAATTTAAAAAAGCCACAATAGCACAGACATTTTTAGTCATGTGTA  >  NC_007793/1600310‑1600409                                                                                                    | tGCAGCAAAAGAAGAAGCGATTCAATTAAGAAAACATAGACGTAATTAATCAACCAATTTAAAAAAGCCACAATAGCACAGACATTTTTAGTCATGTGTa  <  1:5129935/100‑1 (MQ=255)                                                                                                    | TGCAGCAAAAGAAGAAGCGATTCAATTAAGAAAACATAGACGTAATTAATCAACCAATTTAAAAAAGCCACAATAGCACAGACATTTTTAGTCATGTGTA  >  NC_007793/1600310‑1600409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑