| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | NC_007792 | 1,916 | Δ22,120 bp | between repeat_region | SAUSA300_RS14750–SAUSA300_RS14855 | 22 genes SAUSA300_RS14750, SAUSA300_RS14755, SAUSA300_RS14760, SAUSA300_RS14765, SAUSA300_RS14770, SAUSA300_RS14775, SAUSA300_RS14780, SAUSA300_RS14785, SAUSA300_RS14790, SAUSA300_RS14795, SAUSA300_RS14800, SAUSA300_RS14805, SAUSA300_RS14810, SAUSA300_RS14815, SAUSA300_RS14820, SAUSA300_RS14825, SAUSA300_RS14830, SAUSA300_RS14835, SAUSA300_RS14840, SAUSA300_RS14845, SAUSA300_RS14850, SAUSA300_RS14855 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007792 | 1913 | 23249 | 21337 | 105 [2] | [26] 29 | SAUSA300_RS14750–[SAUSA300_RS14850] | 21 genes SAUSA300_RS14750, SAUSA300_RS14755, SAUSA300_RS14760, SAUSA300_RS14765, SAUSA300_RS14770, SAUSA300_RS14775, SAUSA300_RS14780, SAUSA300_RS14785, SAUSA300_RS14790, SAUSA300_RS14795, SAUSA300_RS14800, SAUSA300_RS14805, SAUSA300_RS14810, SAUSA300_RS14815, SAUSA300_RS14820, SAUSA300_RS14825, SAUSA300_RS14830, SAUSA300_RS14835, SAUSA300_RS14840, SAUSA300_RS14845, [SAUSA300_RS14850] |
Only 100 of 105 total aligned reads displayed.
TTTCCCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCAAATTTATAA > NC_007792/1813‑1921 | tttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCa < 1:3696948/100‑1 (MQ=255)tttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCa < 1:2419138/100‑1 (MQ=38)tttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCa < 1:2198933/100‑1 (MQ=38)tttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCa < 1:5312686/100‑1 (MQ=25)tttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCa < 1:79883/100‑1 (MQ=38) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:4663576/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:4352233/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:3827173/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:3395827/100‑2 (MQ=25) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:917355/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:4897598/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCat < 1:1567669/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCac < 1:4352292/100‑2 (MQ=255) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCac < 1:6025545/100‑2 (MQ=25) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCaa < 1:4920051/100‑1 (MQ=25) ttCGCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATA‑TTTTTACTTTGCAACAGAACCatc < 1:3061093/100‑3 (MQ=255) ttCCCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAGCCag > 1:2637136/1‑99 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatt < 1:4526824/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatt < 1:4138329/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatg < 1:4704806/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatg < 1:4947802/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatg < 1:5005125/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:4363507/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:5559218/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:3826211/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:2771725/97‑3 (MQ=25) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:5741469/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:276563/97‑3 (MQ=25) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:2128109/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:1994864/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:1703963/97‑3 (MQ=255) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:1393201/97‑3 (MQ=25) tcgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatc < 1:4985193/97‑3 (MQ=255) tCCCCTTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagc > 1:3272709/1‑98 (MQ=255) tCCCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagc > 1:2727954/1‑98 (MQ=255) tCCCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagc > 1:4493958/1‑98 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAGGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:3498699/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTGTATTTTTTACTTTGCAACAGAACCatca > 1:5529427/3‑97 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatta < 1:2625135/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatgt < 1:564816/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:3121205/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:4015968/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:5082994/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:1657003/98‑4 (MQ=25) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:3684251/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:5905174/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:30334/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:3029749/98‑4 (MQ=255) cgccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCacta < 1:5216311/98‑4 (MQ=255) cgatctGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatca < 1:421992/95‑4 (MQ=255) ccccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcc < 1:6192198/100‑4 (MQ=255) ccccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcc > 1:1314658/1‑97 (MQ=255) ccccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcc < 1:598655/100‑4 (MQ=255) ccccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcc < 1:580104/100‑4 (MQ=255) ccccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcc < 1:3866013/100‑4 (MQ=255) ccccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagca < 1:722316/100‑4 (MQ=255) gccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcat < 1:5599146/99‑5 (MQ=255) gccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcat < 1:6094979/99‑5 (MQ=255) gccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcat < 1:878076/99‑5 (MQ=255) gccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcat < 1:1844507/99‑5 (MQ=255) gccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcag < 1:750339/99‑5 (MQ=255) gccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcag < 1:851731/99‑5 (MQ=255) cccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcaa < 1:234407/100‑5 (MQ=255) cccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcca < 1:803495/100‑5 (MQ=255) cccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcca > 1:204969/1‑96 (MQ=255) atcttGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcac < 1:5963675/96‑5 (MQ=255) atcttGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagcca < 1:1406049/96‑5 (MQ=255) tcATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccat < 1:4819511/99‑6 (MQ=255) ccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcatt < 1:3682947/100‑6 (MQ=255) ccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcagg < 1:1339977/100‑6 (MQ=255) ccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccat > 1:4886740/1‑95 (MQ=255) ccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccat > 1:61662/1‑95 (MQ=255) ccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccat > 1:2571924/1‑95 (MQ=255) ccATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccat > 1:2745244/1‑95 (MQ=255) atctGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccat < 1:417063/97‑6 (MQ=255) cATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatt > 1:2010541/1‑94 (MQ=255) cATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatt < 1:2642383/100‑7 (MQ=255) cATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatt > 1:1786224/1‑94 (MQ=255) cATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccaga < 1:5180923/100‑7 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatccagat > 1:587278/1‑93 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcatttt > 1:1696129/1‑93 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattt > 1:1874754/1‑93 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattt < 1:1997601/100‑8 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattt > 1:3112129/1‑93 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattt < 1:5934089/100‑8 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattt < 1:2998885/100‑8 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattt < 1:2481454/100‑8 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattg < 1:3345865/100‑8 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattc < 1:4860517/100‑8 (MQ=255) aTGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatta < 1:1952002/100‑8 (MQ=255) tGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCatcattttt > 1:4017121/1‑92 (MQ=255) tGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattta > 1:849310/1‑92 (MQ=255) tGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattta > 1:5053237/1‑92 (MQ=255) tGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattta < 1:4168071/100‑9 (MQ=255) tGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccattta < 1:5211954/100‑9 (MQ=255) gCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATCTATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatttaa > 1:4508079/1‑91 (MQ=14) gCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatttaa > 1:343751/1‑91 (MQ=255) gCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatttaa > 1:461337/1‑91 (MQ=255) gCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCagccatttaa > 1:1563694/1‑91 (MQ=255) gCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCAGAtcggaag > 1:436217/1‑94 (MQ=255) | TTTCCCCATGCCACGAAATTAGCATCATGCTAGCAAGTTAAACGAACACTGACATGATATATTAGTGATTAGCTATATTTTTTACTTTGCAACAGAACCAAATTTATAA > NC_007792/1813‑1921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |