| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 926371 | 52 (0.770) | 8 (0.130) | 6/426 | 4.5 | 13.8% | intergenic (‑166/+361) | unknown/unknown | Soluble lytic murein transglycosylase (EC 4.2.2.n1)/YciL protein |
| ? | 1 | = 926650 | 51 (0.810) | intergenic (‑445/+82) | unknown/unknown | Soluble lytic murein transglycosylase (EC 4.2.2.n1)/YciL protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTCGCTTTATGCGTTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/926108‑926371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgttcgaaacattGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAAACGGAGGAAG < 1/926650‑926402 TTCGCTTTATGCGTTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAAC < 1:154212/251‑1TTCGCTTTATGCGTTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAAC < 1:224213/251‑1TTCGCTTTATGCGTTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAAC < 1:30612/251‑1 CTTTATGCGTTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAAC < 1:305014/247‑1 TTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATT > 1:181428/1‑251 GTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGTAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAAC > 1:289445/1‑228 GGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAA > 1:411021/1‑251 GTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTT > 1:535437/1‑251 AATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAAC > 1:544942/1‑202 GTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAAC > 1:99829/1‑162 AATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATC < 1:490222/250‑1 GCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAAC > 1:430969/1‑165 TCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCC < 1:275047/250‑1 TCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCC < 1:543931/250‑1 CTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTGCAACT‑ATTTATGTAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTT > 1:345147/1‑251 TGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATTATAATTCATTGATAT‑‑‑‑TTTTAAATATCTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCC < 1:198776/210‑1 GTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAA > 1:312861/1‑251 GTTCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAA > 1:599304/1‑251 TCGAAACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAAAC < 1:621351/251‑1 AACATTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAAACGGAG < 1:582115/251‑1 TTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAAACGGAGGAAG > 1:293788/1‑251 TTGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAAACGGAGGAAG > 1:9093/1‑251 TTCGCTTTATGCGTTGTCGCCTTGTGCTGATTGGCAAAGGAGGAGGAAAGTGCGGTCAAAATTAACAGTGAAATTGTTGTTTGTTTCAAATATCGCATAGTTATTTTCCTGTGGTGAATATGGGAAAGGCGAATAGTAAGTCTGCCTTTGAAAATGGGCTGAAAGCTGAAATATCGTTGTTAAAGCCGACGGCTGTATTTTAATTTATTAATATTATTACGTGATATAAGCATGCGTCGGGAGACCATAACTGTTCGAAACATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/926108‑926371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgttcgaaacattGCAACT‑ATTTATATAAAAAGAAAAAAAACTTGGCTTCCCTCGTTCACGAGGGGAGCCGGGCGAAGCCCTGAGGGGGCAAAATCTCAATTTTTAAGCATGATCTTGTGGAAACATCAAGATAAATCCCCCCTTCCGCCCTTCGGGCACGTTATTCGCAAGTTCGAAAACTTACTTGCTCACCCCTTTGGGGTCGTTGGCAGAGCCAACGCTCAAAACGCAATGCGTTTTGTCCCCCGTAAACGGAGGAAG < 1/926650‑926402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |