| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1282705 = | 94 (0.830) | 5 (0.050) | 5/428 | 8.0 | 5.2% | intergenic (+143575/+110606) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| ? | 1 | 1282804 = | 91 (0.840) | intergenic (+143674/+110507) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCCCGTCTTCTCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATTCGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1282960‑1282705‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccggTTGCAGCGGTGAATATGCCGAATATTTTGGAAAAAGAAACGTTAAAAGAGCTGACGTTTAACAAACAGGGCTCTGTCGGGATGCCGTTGCCGGGGACGATTATTAAAATTGTGGATCCGGAAACCTTGCAGGAATTAGCAACGGGAGAAGACGGGCTAATTTTAATCGGCGGCGGAC > 1/1282804‑1282980 AGCCCGTCTTCTCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATTCGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCG > 1:722232/1‑250 GTCTTCTCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATTCGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGG > 1:230920/1‑251 GTCTTCTCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATACGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCCTTCAGTTTTTCCGCGCCGG > 1:572171/1‑251 CTCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATTCGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTC > 1:768539/1‑238 TCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATTCGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGGTTGCAG < 1:757007/251‑1 catggtggttgCCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGGTTGCAGCGGTGAATATGCCGAATATTTTGGAAAAAGAAACGTTAAAAGAGCTGACGTTTAACAAACAGGGCTCTGTCGGGATGCCGTTGCCGGGGACGATTATTAAAATTGTGGATCCGGAAACCTTGCAGGAATTAGCAA < 1:892505/240‑1 GTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGGTTGCAGCGGTGAATATGCCGAATATTTTGGAAAAAGAAACGTTAAAAGAGCTGACGTTTAACAAACAGGGCTCTGTCGGGATGCCG < 1:792993/177‑1 TTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCG‑‑‑GCAAC‑‑‑CACCATG‑CGGATATTCTGGAAAAAGAAACGTTAAAAGAGCTGACGTTTAACAAACAGGGCTCTGTCGGGATGCCGTTGCCGGGGACGATTATTAAAATTGTGGATCCGGAAACCTTGCAGGAATTAGCAACGGGAGAAGACGGGCTAATTTTAATC < 1:1065495/250‑1 CCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGGTTGCAGCGGTGAATATGCCGAATATTTTGGAAAAAGAAACGTTAAAAGAGCTGACGTTTAACAAACAGGGCTCTGTCGGGATGCCGTTGCCGGGGACGATTATTAAAATTGTGGATCCGGAAACCTTGCAGGAATTAGCAACGGGAGAAGACGGGCTAATTTTAATCGGCGGCGGAC < 1:395131/250‑1 AGCCCGTCTTCTCCCGTTGCTAATTCCTGCAAGGTTTCCGGATCCACAATTTTAATAATCGTCCCCGGCAACGGCATCCCGACAGAGCCCTGTTTGTTAAACGTCAGCTCTTTTAACGTTTCTTTTTCCAAAATATTCGGCATATTCACCGCTGCAACCGGCGCGGTTTCCGTAGTGCCGTAGCCTTCGTAAATGTCTAAACCGAATTTCAAGCGGAACGCTTCTTTCACATCGGCTTTCAGTTTTTCCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1282960‑1282705‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccggTTGCAGCGGTGAATATGCCGAATATTTTGGAAAAAGAAACGTTAAAAGAGCTGACGTTTAACAAACAGGGCTCTGTCGGGATGCCGTTGCCGGGGACGATTATTAAAATTGTGGATCCGGAAACCTTGCAGGAATTAGCAACGGGAGAAGACGGGCTAATTTTAATCGGCGGCGGAC > 1/1282804‑1282980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |