New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 1854493 =36 (0.290)4 (0.030) 4/420 9.1 14.8% intergenic (+44428/‑94960) unknown/unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC
?1 1854932 = 12 (0.100)intergenic (+44867/‑94521) unknown/unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACTTCAAGTTTTCCTTTATATGGTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCAAAGAAAAAAATATGCCTAATAAAATAAAATTTGTTTCTGGAAATTTTGAAAATAAAACAATTTGTCTAAATTGTTCTATGT  >  1/1854718‑1855132
                                                                                                                                                                                                                      |                                                                                                                                                                                                        
aaCTTCAAGTTTTCCTTTATATGGTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAatta                                                                                                                                                                      <  1:830451/251‑1 (MQ=255)
             ccTTTATATGGTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCAt                                                                                                                                                                                     <  1:1184594/223‑1 (MQ=255)
             ccTTTATATGGTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCAt                                                                                                                                                         >  1:324856/1‑251 (MQ=255)
             ccTTTATATGGTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCAt                                                                                                                                                         >  1:911171/1‑251 (MQ=255)
                       gTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAatt                                                                                                                                                                       >  1:821598/1‑227 (MQ=255)
                         tttAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTAc                                                                                                                                             <  1:335733/251‑1 (MQ=255)
                              aaTTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAat                                                                                                                                          <  1:491598/249‑1 (MQ=255)
                                            gTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCAt                                                                                                                                                                                     >  1:287814/1‑192 (MQ=255)
                                                                            gTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAAc                                                                                             >  1:959595/1‑248 (MQ=255)
                                                                            gTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAAt                                                                                          >  1:946277/1‑251 (MQ=255)
                                                                                                                                                                    ttAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCAAAGAAAAAAATATGCCTAATAAAATAAAATTTGTTTCTGGAAATTTTGAAAATAAAACAATTTGTCTAAATTGTTCtatgt  <  1:938805/251‑1 (MQ=255)
                                                                                                                                                                            tttATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTc                                                                                                                                  >  1:65817/1‑115 (MQ=255)
                                                                                                                                                                                                              ccATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCa                                                                                   >  1:888774/1‑128 (MQ=255)
                                                                                                                                                                                                                      |                                                                                                                                                                                                        
AACTTCAAGTTTTCCTTTATATGGTTTTAGAATTCCACAGATAAGTTTTAGTAGTGTAGATTTTCCTGAGCCATTAGTACCAATCAATCCCCAAGATTCACCCTTTTTAACTTTAAAAGAAACATCATTTAATGATAAAAATTCTTGGAACATTAACTTTCCTTTTAGCATTTTTATAATGTAGTCTTTTAAGCCGCTATAATTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCAAAGAAAAAAATATGCCTAATAAAATAAAATTTGTTTCTGGAAATTTTGAAAATAAAACAATTTGTCTAAATTGTTCTATGT  >  1/1854718‑1855132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.