| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1854493 = | 36 (0.290) | 4 (0.030) | 4/420 | 9.1 | 14.8% | intergenic (+44428/‑94960) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| ? | 1 | 1854932 = | 12 (0.100) | intergenic (+44867/‑94521) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTAGGATATGATAAATCTTTAATGGATACTCATTTTGAAGAAATAATTGAATTTGCTGAATTAAACGAGTTTATTGATGTTCCTATTAAAAACTTTTCTTCGGGAATGTCTGCTAGATTAGGTTTTTCCATTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1854628‑1854493‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttccattgctTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCAAAGAAAAAAATATGCCTAATAAAATAAAATTTGTTTCTGGAAATTTTGAAAATAAAAC > 1/1854932‑1855109 GTTAGGATATGATAAATCTTTAATGGATACTCATTTTGAAGAAATAATTGAATTTGCTGAATTAAACGAGTTTATTGATGTTCCTATTAAAAACTTTTCTTCGGGAATGTCTGCTAGATTAGGTTTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAAC < 1:752503/246‑1 AAACGAGTTTATTGATGTTCCTATTAAAAACTTTTCTTCGGGAATGTCTGCTAGATTAGGTTTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCAAAGAAAAAAATATGCCTAATAAAATAAAATTTGTTTCTGGAAATTTTGAAAATAAAAC < 1:201703/251‑1 GTTTATTGATGTTCCTATTAAAAACTTTTCTTCGGGAATGTCTGCTAGATTAGGTTTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTA < 1:289914/122‑1 ATTAAAAACTTTTCTTCGGGAATGTCTGCTAGATTAGGTTTTTCCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATG > 1:1161430/1‑165 CCATTGCTTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCA > 1:888774/1‑128 GTTAGGATATGATAAATCTTTAATGGATACTCATTTTGAAGAAATAATTGAATTTGCTGAATTAAACGAGTTTATTGATGTTCCTATTAAAAACTTTTCTTCGGGAATGTCTGCTAGATTAGGTTTTTCCATTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/1854628‑1854493‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttccattgctTTATTAAAGCGAACAGTAGCATTTTCAACGTTAATTATTTCTGTATTCATAGCTATATGTACAATATAAATTCATCTTGTTTCTTGTTAAAATACCAAGTACCTAAAAACAATGTTATCAAAGAAAAAAATATGCCTAATAAAATAAAATTTGTTTCTGGAAATTTTGAAAATAAAAC > 1/1854932‑1855109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |