| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 16273 = | 67 (0.540) | 7 (0.060) | 4/430 | 9.2 | 10.3% | intergenic (–/‑81819) | –/unknown | –/tRNA‑Pseudo‑??? |
| ? | 1 | 16690 = | 57 (0.470) | intergenic (–/‑81402) | –/unknown | –/tRNA‑Pseudo‑??? | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/16395‑16273‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttatcgTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTATGCAAAATCCTGAGCAATACAAAAAAGATATCGAAACGCATACTCAAGTCACCAGCTCGTGTGTTCATCTGTATGATTCCTACGTTTTAAAAGAAGGTAAACGAGAAAGCAATATC > 1/16690‑16933 CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTA > 1:1053872/1‑251CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTA > 1:240710/1‑251CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTA > 1:788379/1‑251CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGT > 1:503797/1‑223CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGT < 1:722001/223‑1 TTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTATGCAAAATCCTGAGCAATACAAAAAAGATATCGAAACGCATACTCAAGTCACC < 1:773599/251‑1 TAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTATGCAAAATCCTGAGCAATACAAAAAAGATATCGAAACGCATACTCAAGTCACCAGCTCGTGTGTTCATCTGTATGATTC < 1:542705/251‑1 TTTATCGTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTATGCAAAATCCTGAGCAATACAAAAAAGATATCGAAACGCATACTCAAGTCACCAGCTCGTGTGTTCATCTGTATGATTCCTACGTTTTAAAAGAAGGTAAACGAGAAAGCAATATC < 1:574092/251‑1 CGTTTTAATACTTGTGTGTAGTCCAATCTTTCTGTGCGAATTGCCTGTAAGCATTTGAGGTATTTGTTTTTACTTTCTTTAAAAATACCTGAATTTTCGAGTGCTTCCCTTATTTCTTTATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/16395‑16273‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttatcgTTTTTCGGGTGGTAAGTTAGAAGTGACCACACAATTTGGAAGAATGATTGGTTCCCACACGTTAAGTAAGTTAGAGAAAACCTACCGCTATAACAATAGTATTGCAAATACCGCAGGACGCTTCATTATGCAAAATCCTGAGCAATACAAAAAAGATATCGAAACGCATACTCAAGTCACCAGCTCGTGTGTTCATCTGTATGATTCCTACGTTTTAAAAGAAGGTAAACGAGAAAGCAATATC > 1/16690‑16933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |