| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 429,393 | Δ9,084 bp | intergenic (‑12571/‑58987) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 429393 | 438476 | 9084 | 77 [0] | [0] 77 | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 429392 | 0 (0.000) | 77 (0.880) | 49/426 | 0.5 | 100% | intergenic (‑12570/‑68071) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA |
| ? | 1 | 438477 = | 0 (0.000) | intergenic (‑21655/‑58986) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑SeC(p)‑TCA | |||||
AGCAAAAGGTTTTGCTCATGTTTTAGCTATATCCAAATTTTTAAAAGTCTGAATCTCCGTCGGAGTTATTTAGAACAGTTTTCAACTCTCAGAAAGAAGCAATATGGCACGCACAATCACGCCGTTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTAACTATTACAAGCCTTTCACGCAACCAAAGAAAAGGGCGTTAATTGGCGTTGGCAAATACCCTGATATTTCCTTACAGCAGGCAAGAGCAATTAGAGAGGAATATTTATCTTTACTTGCGCAGAATATCGATCCGGCAATCTATCGCCAACAGCAAGAACAAGCTAAGCAAAATGAGCTGAATAATACCTATGAAGCAGTGGCGTGGGCGTGGCTTGAGTATCGCAAAACCAAAAAAAACTTTT > 1/429155‑429636 | aGCAAAAGGTTTTACTCATGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTACCCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgttttagtt > 1:185195‑M1/1‑239 (MQ=255) gCAAAAGGTTTTACTCATGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAAGGGGGCTAAGTTATGGCGG‑TTTcccgttttagtttt > 1:615660‑M1/1‑237 (MQ=255) ttttACTCATGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaagg < 1:41447‑M1/250‑22 (MQ=255) tGTTTTAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGGTTTTcccgtttagttttttaaa > 1:333238‑M1/1‑221 (MQ=255) ttttAGCTATACCTGATTTTTTAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaa < 1:843830‑M1/250‑33 (MQ=255) tttttAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagcc < 1:471297‑M1/251‑51 (MQ=255) tAAAAGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccactt < 1:344987‑M1/251‑55 (MQ=255) aaaaGTCTGAATTGCCGTCAGAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttc < 1:117369‑M1/251‑56 (MQ=255) gAGTTATTCAGAATAATTTTCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagcc < 1:462182‑M1/226‑51 (MQ=255) agaataattttcaactctCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccac < 1:315874‑M1/212‑53 (MQ=255) gaataattttcaactcTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttttgctt > 1:256472‑M1/7‑166 (MQ=255) tttCAACTCTCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgttttagttttttaaaggcttgtggtgaaaagtcactttttttagccccttcaatctgcgttctttttatttgggggtttagaattttt > 1:275843‑M1/1‑159 (MQ=255) ctctCAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgtttcagtttttttaaagcttgtggtggaaaggcacttgttttagccccttccatctgcgttctttttcttttggggtttagaatttttgtgggt > 1:175262‑M1/1‑153 (MQ=255) tctcAGAATTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgtttcaggttttttaaggcttttggtgaaaagtcacttgttttagccacttccatctgcgtttttttcttttttgggttcagaatttttggggttt > 1:412820‑M1/1‑152 (MQ=255) tctcAGAACTAAGCGATATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaagggttgtggggaaaaaacacttgttttagccacttcaatctgcgttctttttattttgggtttcagaatttttggggttt > 1:285485‑M1/1‑152 (MQ=255) gaactaagcgataTGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggagg < 1:167973‑M1/238‑97 (MQ=255) gaactaagcgataTGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaagg < 1:260739‑M1/163‑22 (MQ=255) gaactaagcgataTGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcaggttttttaaagcttgtgggggaaaggcacttgttttagccacttcaatctgcgttctttttattttggggtttagaattttggagggttttggg > 1:677091‑M1/6‑147 (MQ=255) aactaagcgatATGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttagg < 1:123418‑M1/245‑104 (MQ=255) cgatatggCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCTAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtat < 1:750633‑M1/247‑111 (MQ=255) cgatatggCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtat < 1:364045‑M1/247‑111 (MQ=255) atatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgttttagtttttttaaggcttgtggtgaaaaggcacttgttttagccacttcaatctgcgttctttttcttttggggtttagaatttttgggggtttaggttttgataaag > 1:409847‑M1/1‑137 (MQ=255) atatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtat < 1:49535‑M1/247‑111 (MQ=255) tatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc < 1:310254‑M1/251‑116 (MQ=255) tatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc < 1:339877‑M1/251‑116 (MQ=255) tatGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc < 1:565867‑M1/251‑116 (MQ=255) atGGCACGCACAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcg < 1:833683‑M1/251‑117 (MQ=255) cacgcacAATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattt < 1:62849‑M1/251‑121 (MQ=255) caATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaagcttgtggggaaaaggcacttgttttagccacttccatctgcggtcttttcctttgggggttcagaattttggagggttttgggttgtataaagcgattttatgc > 1:194325‑M1/1‑125 (MQ=255) caATCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttgggg < 1:895058‑M1/204‑80 (MQ=255) aTCACACCGCTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaggcttgtggtggaaagtcacttgtttcagccacttcaatctgcgttctttttattttggggttcagaatttttgaggtttttgg > 1:141888‑M1/1‑123 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaggcttttggggaaaagtcacttgtttcagccccttcaatctgcgttctttttattttgggtttcagaatttttgagggtttttgtttttataaggcgatttttcgccatcaagc > 1:240126‑M1/5‑117 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaagcttgtgggggaaaa > 1:716238‑M1/5‑117 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggc < 1:36136‑M1/228‑116 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataagg < 1:540832‑M1/227‑115 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcag < 1:803993‑M1/198‑86 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatt < 1:378310‑M1/187‑75 (MQ=255) ccgctaaacAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatt < 1:348598‑M1/187‑75 (MQ=255) cgctaaaCAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccc < 1:687848‑M1/248‑136 (MQ=255) gctaaACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattt < 1:636200‑M1/233‑121 (MQ=255) gctaaACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatc < 1:662489‑M1/172‑60 (MQ=255) cACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacg < 1:393851‑M1/250‑145 (MQ=255) cACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcac < 1:606530‑M1/249‑144 (MQ=255) cACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcac < 1:882264‑M1/249‑144 (MQ=255) aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgtttcagtttttttaaggcttgtggggaaaaatcacttgttttagccacctcaatctgcgtttttttcattttggg > 1:8083‑M1/1‑102 (MQ=255) aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtt < 1:386250‑M1/207‑106 (MQ=255) aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTccccttttagtttttttaagggttgtggggaaaagacacttgtttcagccccttcaatatgcgttttttttatttgggggttcagaaattttgagggttttggtttgtataaggcggtttttcgccatcaagccctcttttacgaaagg > 1:792754‑M1/1‑102 (MQ=255) aaaaTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTccccgttccgttttttaaaggg > 1:818448‑M1/1‑102 (MQ=255) aTAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctcttt < 1:449009‑M1/239‑141 (MQ=255) aCAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttcc < 1:157348‑M1/251‑157 (MQ=255) gccaagccGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTccccgttcag > 1:376129‑M1/1‑90 (MQ=255) gccGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttt < 1:10832‑M1/98‑14 (MQ=255) cAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttccgtttttttaaggcttgtggggaaaaggcactttttttagcccctttcatctgcgcttttttcatttgggggttcagaattttggaggtttttggtttgtataaggggatttttcgccatcaagccccctttcccgaaaggcttttccaataaatgacttta > 1:474698‑M1/1‑81 (MQ=255) aaaaGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaa < 1:130436‑M1/250‑174 (MQ=255) gAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTtccgtttcaggttttttaaggcttgtggggaaaagacacttgtttcagccccttcaatctgcgttctttttatttgggggttcagaattttggagggtttaggtttgtataaggcgattttacgccatcaaaccctcttttccggaaggctttttcaataaaatacttgagaaagagaa > 1:63868‑M1/1‑72 (MQ=255) tttA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatc < 1:690627‑M1/251‑183 (MQ=255) cTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGTCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggggaaaaatcacttgtttcagccacttcaatctgcgttcttttcatttgggggttcagaattttggagggtttagggttgtataaagcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatga > 1:282367‑M1/1‑63 (MQ=255) aTCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatc < 1:544365‑M1/243‑183 (MQ=255) aTCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatc < 1:437347‑M1/120‑60 (MQ=255) ggCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttagg < 1:869470‑M1/157‑104 (MQ=255) gCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaagcttgtggtggaaagtcacttgtttcagccacttcaatctgcgttctttttattttggggtttagaattttggagggttttgggttgtataaagcgattttacgccatcaagccctctttcacgaaaggctttttcaataaatgacttgagaaagagaaaactgatgaaatttagcta > 1:179416‑M1/1‑53 (MQ=255) ggCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgct < 1:12486‑M1/250‑204 (MQ=255) aTCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatatac < 1:778861‑M1/251‑211 (MQ=255) aTCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatatac < 1:865133‑M1/251‑211 (MQ=255) ggTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacg < 1:538363‑M1/209‑176 (MQ=255) ggTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatc < 1:732923‑M1/93‑60 (MQ=255) ttAAGCCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcc < 1:110598‑M1/250‑219 (MQ=255) aCCCAATGGGGCTAAGTTATGGCGG‑TTTcccgtttcagtttttttaaggcttgtggggaaaaggcacttgttttagccacttcaatctgcgttcttttcatttgggggttcagaatttttgagggtttagggttttataaggcgattttacgccatcaagccctctttcacgaaaagcttttt > 1:719533‑M1/1‑28 (MQ=255) aaGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataagg < 1:240571‑M1/129‑115 (MQ=255) aGTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatat < 1:495177‑M1/222‑209 (MQ=255) gTTATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatg < 1:875122‑M1/177‑165 (MQ=255) ttATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttt < 1:776495‑M1/81‑70 (MQ=255) tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa < 1:99925‑M1/251‑241 (MQ=255) tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa < 1:836864‑M1/251‑241 (MQ=255) tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa < 1:462969‑M1/251‑241 (MQ=255) tATGGCGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataa < 1:224668‑M1/251‑241 (MQ=255) cGG‑TTTcccgtttcagttttttaaaggcttgtggtgaaaagtcacttgtttcagccacttcaatctgcgttcttttcatttggggtttcagaattttggaggttttaggtttgtataaggcgattttacgccatcaagccctctttcacgaaaggcttttccaataaatgacttgagaacgagaaatctgatgaaatttagctaccgctcatataccgaaatcctgctcggtgaccggcttgataatttt < 1:460453‑M1/250‑245 (MQ=255) | AGCAAAAGGTTTTGCTCATGTTTTAGCTATATCCAAATTTTTAAAAGTCTGAATCTCCGTCGGAGTTATTTAGAACAGTTTTCAACTCTCAGAAAGAAGCAATATGGCACGCACAATCACGCCGTTAAACAGCACGAAAATAGACAAAGCCAAGCCGCAGGAAAAGGAATTTA‑CCCTATCCGATGGCAAAGGGCTTTATCTGTTGGTTAAACCCAATGGGGCTAAGTTATGGCGG‑TTTAACTATTACAAGCCTTTCACGCAACCAAAGAAAAGGGCGTTAATTGGCGTTGGCAAATACCCTGATATTTCCTTACAGCAGGCAAGAGCAATTAGAGAGGAATATTTATCTTTACTTGCGCAGAATATCGATCCGGCAATCTATCGCCAACAGCAAGAACAAGCTAAGCAAAATGAGCTGAATAATACCTATGAAGCAGTGGCGTGGGCGTGGCTTGAGTATCGCAAAACCAAAAAAAACTTTT > 1/429155‑429636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |