| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 197,628 | 1526 bp→TATTACTACTGCCGGA | intergenic (+64317/+63078) | unknown → / ← unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 197628 | 199153 | 1526 | 118 [0] | [1] 118 | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 197627 | 0 (0.000) | 97 (1.190) +TATTACTACTGCCGGA |
74/388 | 0.0 | 99.5% | intergenic (+64316/+64604) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | 1 | 199154 = | 1 (0.010) | intergenic (+65843/+63077) | unknown/unknown | tRNA‑Val‑TAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA | |||||
Only 100 of 118 total aligned reads displayed.
AAAGAAAAGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTACGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCTATTATTACTACTGCCGGATATAGCGGAGTGCGAATCGCATTAATTACAGCAGCTATGGGGGCCGGTTCTATGACATTGTCGCATGTGAACGACAGCCTATTCTGGGTATGGACAAAGTTCTTTGGGATCTCTGTCGCTGACGGATTAAAAACCTGGACTATTCTTACCACGATATACGGAAGTATTGCATTCTTAATTATTAGTTTGATGTGGTTCTTTATTTAACATTTAAAAGTAAGGAAACATTT > 1/197380‑197876 | aaaGAAAAGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtat < 1:778396‑M1/251‑4 (MQ=255) aaaaGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattact < 1:315737‑M1/251‑8 (MQ=255) aaaaGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattact < 1:653523‑M1/251‑8 (MQ=255) aaGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactac < 1:430955‑M1/251‑10 (MQ=255) aGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattacta > 1:593443‑M1/1‑241 (MQ=255) gTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGAACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattacta < 1:580290‑M1/248‑9 (MQ=255) gaaATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggata > 1:218320‑M1/1‑233 (MQ=255) ttCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacgg > 1:799547‑M1/1‑229 (MQ=255) aCTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggaga < 1:842737‑M1/251‑29 (MQ=255) tCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccg > 1:619033‑M1/1‑218 (MQ=255) ggCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtct > 1:787802‑M1/1‑213 (MQ=255) aaTTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataat < 1:636528‑M1/251‑45 (MQ=255) ttGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGTATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataatta < 1:459577‑M1/251‑47 (MQ=255) ttGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataatta > 1:503947‑M1/1‑205 (MQ=255) ttGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataatta < 1:721108‑M1/251‑47 (MQ=255) ggATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctc > 1:393922‑M1/1‑199 (MQ=255) aTCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactc < 1:31947‑M1/251‑58 (MQ=255) aTCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactc < 1:191957‑M1/251‑58 (MQ=255) aTCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataatta < 1:565882‑M1/240‑47 (MQ=255) cTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcag > 1:392355‑M1/1‑192 (MQ=255) aaTTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcaggga < 1:464195‑M1/251‑63 (MQ=255) tACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattg < 1:511359‑M1/251‑66 (MQ=255) gTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatg < 1:865246‑M1/250‑70 (MQ=255) gTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattact > 1:404071‑M1/1‑181 (MQ=255) ccGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgagga < 1:218298‑M1/251‑74 (MQ=255) ggTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtc < 1:479279‑M1/200‑37 (MQ=255) cAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgagga < 1:618972‑M1/221‑74 (MQ=255) gtgtAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggaggtcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaa > 1:442971‑M1/1‑142 (MQ=255) gtgtAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaa > 1:471276‑M1/1‑142 (MQ=255) gtgtAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaa > 1:397073‑M1/1‑142 (MQ=255) ggAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgagga < 1:250585‑M1/210‑74 (MQ=255) ggCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttat < 1:401859‑M1/218‑87 (MQ=255) ggCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaat > 1:248105‑M1/1‑126 (MQ=255) gCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgagga > 1:384171‑M1/1‑125 (MQ=255) gTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaac < 1:544222‑M1/250‑132 (MQ=255) gTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaac > 1:623633‑M1/1‑119 (MQ=255) gTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaac > 1:271405‑M1/1‑119 (MQ=255) gTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaac > 1:332427‑M1/1‑119 (MQ=255) gTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgta > 1:108475‑M1/1‑119 (MQ=255) cTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggat > 1:790638‑M1/1‑116 (MQ=255) aTCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattg < 1:123644‑M1/179‑66 (MQ=255) aTCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggat < 1:201283‑M1/177‑64 (MQ=255) aTCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcc > 1:822200‑M1/1‑114 (MQ=255) ccGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaa < 1:355623‑M1/251‑140 (MQ=255) ggATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcatttt > 1:651792‑M1/1‑104 (MQ=255) ggATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagc < 1:746107‑M1/183‑80 (MQ=255) gATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcatttt > 1:222921‑M1/1‑103 (MQ=255) gATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcatttt > 1:32655‑M1/1‑103 (MQ=255) gATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaag < 1:833928‑M1/244‑142 (MQ=255) aTTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttc < 1:289234‑M1/250‑149 (MQ=255) gTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataatta < 1:563714‑M1/141‑47 (MQ=255) ttCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaa > 1:566162‑M1/1‑94 (MQ=255) ttCTTACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattact > 1:123587‑M1/1‑94 (MQ=255) ttACATTAGGTTTTGTGCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaag < 1:459008‑M1/251‑161 (MQ=255) tgtgCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaa < 1:67782‑M1/251‑174 (MQ=255) gtgCTAGCAGCATTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattact > 1:509558‑M1/1‑77 (MQ=255) gcaTTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagag > 1:864609‑M1/1‑68 (MQ=255) gcaTTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatg > 1:786660‑M1/1‑68 (MQ=255) caTTATTATGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatac < 1:347989‑M1/251‑185 (MQ=255) ttattaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatactta > 1:219769‑M1/1‑65 (MQ=255) ttattaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaat < 1:700432‑M1/239‑175 (MQ=255) ttattaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtat > 1:572014‑M1/1‑65 (MQ=255) attaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttat > 1:603712‑M1/1‑63 (MQ=255) attaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttat > 1:407651‑M1/1‑63 (MQ=255) attaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttat > 1:8827‑M1/1‑63 (MQ=255) attaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaat < 1:599524‑M1/237‑175 (MQ=255) attaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagag < 1:319249‑M1/176‑114 (MQ=255) attaTGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactac < 1:109568‑M1/72‑10 (MQ=255) tgcgcaGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaa < 1:466639‑M1/250‑193 (MQ=255) gcaCAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaacttta > 1:644306‑M1/1‑53 (MQ=255) aGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactga > 1:289587‑M1/1‑48 (MQ=255) ggTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaatacc < 1:354304‑M1/175‑129 (MQ=255) gTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaag > 1:398106‑M1/1‑46 (MQ=255) cTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggtt > 1:423124‑M1/1‑43 (MQ=255) gTGGCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggat > 1:560614‑M1/1‑35 (MQ=255) ggCAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaa < 1:474199‑M1/225‑193 (MQ=255) cAATTATTACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaa > 1:591130‑M1/1‑31 (MQ=255) attattACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgta < 1:354485‑M1/96‑68 (MQ=255) attattACTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggcctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaaacattttcattggaaaaaagtggtggcttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcgg > 1:450032‑M1/1‑29 (MQ=255) ttattaCTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaat < 1:840158‑M1/202‑175 (MQ=255) tattaCTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagccttttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcgg > 1:436737‑M1/1‑27 (MQ=255) tattaCTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcgg > 1:140681‑M1/1‑27 (MQ=255) tattaCTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcgg > 1:763146‑M1/1‑27 (MQ=255) tattaCTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaa < 1:478796‑M1/200‑174 (MQ=255) attaCTACTGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagt < 1:308477‑M1/187‑162 (MQ=255) tactGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagta > 1:687881‑M1/1‑21 (MQ=255) ctGCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtaga > 1:597310‑M1/1‑19 (MQ=255) gCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtag > 1:533222‑M1/1‑17 (MQ=255) gCAACAATTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagc < 1:469810‑M1/159‑143 (MQ=255) caacaaTTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagaggg < 1:502152‑M1/251‑236 (MQ=255) caaTTCTATCGCCtattactactgccggataacggtggagatcccggtctccataatta > 1:799623‑M1/1‑13 (MQ=255) aaTTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagagggtact < 1:593776‑M1/251‑240 (MQ=255) aTTCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagagggtact > 1:651127‑M1/1‑11 (MQ=255) tCTATCGCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagagggtactcat > 1:453047‑M1/1‑9 (MQ=255) gCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatg > 1:731190‑M1/1‑3 (MQ=255) gCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaag < 1:126406‑M1/114‑112 (MQ=255) gCCtattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgagga < 1:720841‑M1/76‑74 (MQ=255) gCCtattactactgccggataacggtggagatcccggtctccataattatctccttacccagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagagggtactcatttaggt > 1:821324‑M1/1‑3 (MQ=255) cctattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagagggtactcatttaggtg > 1:495956‑M1/1‑2 (MQ=255) cctattactactgccggataacggtggagatcccggtctccataattatctccttactcagggattgtatgaggaaatagccggttatcgtgaaaaatcttttccggttaaagagttagctaaaaataccaaccgtctaaaagcattttcattggaaaaaagtggtggtttacaatgggatcatacttatggaaactttactgacggttcagcaagacgagcggctttagtagagggtactcatttaggtg < 1:50289‑M1/251‑250 (MQ=255) | AAAGAAAAGTTAGAAGAAATTCTTAACTCATCTTTGGCACCAATTGCCGGGATTATCTTAATTACAGGTGCCGGCGGGATGTTTGGTAAAGTTTTAGATGCAAGTGGTGTAGGAAAGGCATTGGCTGAGGTACTATCCGGCACCGGATTACATGTTCTTACATTAGGTTTTGTGCTAGCAGCATTATTACGCGCAGCACAAGGTTCTGCGACAGTGGCAATTATTACTACTGCAACAATTCTATCGCCTATTATTACTACTGCCGGATATAGCGGAGTGCGAATCGCATTAATTACAGCAGCTATGGGGGCCGGTTCTATGACATTGTCGCATGTGAACGACAGCCTATTCTGGGTATGGACAAAGTTCTTTGGGATCTCTGTCGCTGACGGATTAAAAACCTGGACTATTCTTACCACGATATACGGAAGTATTGCATTCTTAATTATTAGTTTGATGTGGTTCTTTATTTAACATTTAAAAGTAAGGAAACATTT > 1/197380‑197876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |