New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	1330313 =	0 (0.000)	22 (0.290)	15/376	3.1	100%	intergenic (+170733/+90624)	unknown/unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT
	?	1	= 1330302	0 (0.000)					intergenic (+170722/+90635)	unknown/unknown	tRNA‑Val‑GAC/tRNA‑Met‑CAT
Rejected: Coverage evenness skew score above cutoff.

CCCAACCAGTTCATTTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAA  >  1/1330056‑1330518                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                         ttcatttcgtaaaattcacggctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggc                                                                                                                                                                                                                      <  1:775374‑M2/133‑1 (MQ=255)      ttcgtaaaattcacggctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggc                                                                                                                                                                                                                 <  1:402172‑M2/138‑1 (MQ=255)                tcacggctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggc                                                                                                                                                                                                       <  1:487610‑M2/148‑1 (MQ=255)                tcacggctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggc                                                                                                                                                                                                       <  1:358413‑M2/148‑1 (MQ=255)                      ctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggcaaggca                                                                                                                                                                                                 <  1:631829‑M2/154‑1 (MQ=255)                              ggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTtagtttaggcaaggcaaggcaaggcaaggcaagcatatt                                                                                                                                                                                         >  1:305433‑M2/90‑245 (MQ=255)                                   gttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGtttagtttaggcaaggcaaggcaaggcaaggcaagcatatttt                                                                                                                                                                                       >  1:870213‑M2/85‑240 (MQ=255)                                                 gattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATtttgcttgcaattaacgtttagtttaggcaaggcaaggcaaggcaaggcaagcatattttttactcctattactggt                                                                                                                                                                      >  1:441213‑M2/71‑226 (MQ=255)                                                  attggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATtttgcttgcaattaacgtttagtttaggcaaggcaaggcaaggcaaggcaagcatattttttactcctattactggt                                                                                                                                                                      <  1:542898‑M2/181‑26 (MQ=255)                                                  attggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTttgcttgcaattaacgtttagtttaggcaaggcaaggcaaggcaaggcaagcatattttttactcctattactgg                                                                                                                                                                       <  1:469339‑M2/180‑25 (MQ=255)                                                   ttggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggc                                                                                                                                                                                                                 >  1:125632‑M2/69‑206 (MQ=255)                                                                aataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAgt                                                                                                                                             >  1:843693‑M2/56‑251 (MQ=255)                                                                  taaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAA‑TTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTAc                                                                                                                                                  >  1:636407‑M2/54‑243 (MQ=255)                                                                        ttgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTg                                                                                                                                     <  1:511262‑M2/204‑1 (MQ=255)                                                                                ttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATAc                                                                                                                             <  1:170108‑M2/212‑1 (MQ=255)                                                                                     tcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAatat                                                                                                                        <  1:22655‑M2/217‑1 (MQ=255)                                                                                        aaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggcaaggc                                                                                                                                                                                                  >  1:692605‑M2/32‑184 (MQ=255)                                                                                                  ggaaaagagctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATAc                                                                                                                             >  1:734897/22‑233 (MQ=255)                                                                                                        gagctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGaa                                                                                                     >  1:137326/16‑251 (MQ=255)                                                                                                          gctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATGAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTATCAAGTACAAAGTGTACTTTGTTTTATACAatat                                                                                                                        <  1:34500/217‑1 (MQ=255)                                                                                                          gctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAg                                                                                                                    >  1:275169/14‑234 (MQ=255)                                                                                                                              ggTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTAc                                                                                                                                         <  1:71705/193‑1 (MQ=255)                                                                                                                                   gTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATaaa                                                                          >  1:697985/1‑251 (MQ=255)                                                                                                                                            agTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTg                                                                   <  1:330672/249‑1 (MQ=255)                                                                                                                                                 gCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAatgatg                                                            >  1:320664/1‑251 (MQ=255)                                                                                                                                                                      aaaaGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTc                                        <  1:99769/250‑1 (MQ=255)                                                                                                                                                                                         tttATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAatat                                                                                                                        <  1:42710/151‑1 (MQ=255)                                                                                                                                                                                               ctccGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGc              <  1:651693/251‑1 (MQ=255)                                                                                                                                                                                               ctccGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGc              <  1:515156/251‑1 (MQ=255)                                                                                                                                                                                                           ttttAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCaataa  <  1:762537/251‑1 (MQ=255)                                                                                                                                                                                                                      gTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTc                                                        >  1:509339/1‑186 (MQ=255)                                                                                                                                                                                                                      gTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACt                  <  1:230110/224‑1 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                         CCCAACCAGTTCATTTCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAA  >  1/1330056‑1330518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.