| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 1330313 = | 0 (0.000) | 22 (0.290) | 15/376 | 3.1 | 100% | intergenic (+170733/+90624) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT |
| ? | 1 | = 1330302 | 0 (0.000) | intergenic (+170722/+90635) | unknown/unknown | tRNA‑Val‑GAC/tRNA‑Met‑CAT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGT > 1/1330071‑1330556 | tcacggctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggc < 1:487610‑M2/148‑1 (MQ=255)tcacggctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggc < 1:358413‑M2/148‑1 (MQ=255) ctgatgtcggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggcaaggca < 1:631829‑M2/154‑1 (MQ=255) ggcttgttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTtagtttaggcaaggcaaggcaaggcaaggcaagcatatt > 1:305433‑M2/90‑245 (MQ=255) gttctgcaatttcagattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGtttagtttaggcaaggcaaggcaaggcaaggcaagcatatttt > 1:870213‑M2/85‑240 (MQ=255) gattggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATtttgcttgcaattaacgtttagtttaggcaaggcaaggcaaggcaaggcaagcatattttttactcctattactggt > 1:441213‑M2/71‑226 (MQ=255) attggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATtttgcttgcaattaacgtttagtttaggcaaggcaaggcaaggcaaggcaagcatattttttactcctattactggt < 1:542898‑M2/181‑26 (MQ=255) attggaatttttctaataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTttgcttgcaattaacgtttagtttaggcaaggcaaggcaaggcaaggcaagcatattttttactcctattactgg < 1:469339‑M2/180‑25 (MQ=255) aataaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAgt > 1:843693‑M2/56‑251 (MQ=255) taaaaattgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAA‑TTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTAc > 1:636407‑M2/54‑243 (MQ=255) ttgaccgcttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTg < 1:511262‑M2/204‑1 (MQ=255) ttacatcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATAc < 1:170108‑M2/212‑1 (MQ=255) tcgaaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAatat < 1:22655‑M2/217‑1 (MQ=255) aaacaattcgggaaaagagctttaagttgggTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTaggcaaggcaaggcaaggcaaggc > 1:692605‑M2/32‑184 (MQ=255) ggaaaagagctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATAc > 1:734897/22‑233 (MQ=255) gagctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGaa > 1:137326/16‑251 (MQ=255) gctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATGAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTATCAAGTACAAAGTGTACTTTGTTTTATACAatat < 1:34500/217‑1 (MQ=255) gctttaagttgggtAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAg > 1:275169/14‑234 (MQ=255) ggTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTAc < 1:71705/193‑1 (MQ=255) gTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATaaa > 1:697985/1‑251 (MQ=255) agTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTg < 1:330672/249‑1 (MQ=255) gCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAatgatg > 1:320664/1‑251 (MQ=255) aaaaGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTc < 1:99769/250‑1 (MQ=255) tttATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAatat < 1:42710/151‑1 (MQ=255) ctccGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGc < 1:515156/251‑1 (MQ=255) ctccGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGc < 1:651693/251‑1 (MQ=255) ttttAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCaataa < 1:762537/251‑1 (MQ=255) gTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTc > 1:509339/1‑186 (MQ=255) gTGATAGATTTTGCTTGCAATTAACGTTTAGTTT‑‑‑‑‑‑‑‑‑‑AGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACt < 1:230110/224‑1 (MQ=255) tagtttaggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGt > 1:109985/7‑250 (MQ=255) agtttaggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGc > 1:563741/6‑199 (MQ=255) gtttaggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTa < 1:82494/158‑1 (MQ=255) gtttaggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTTGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGc < 1:446700/194‑1 (MQ=255) aggcaaggcaaggcaaggcaaggcaagCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTc < 1:125110/152‑1 (MQ=255) | TCGTAAAATTCACGGCTGATGTCGGCTTGTTCTGCAATTTCAGATTGGAATTTTTCTAATAAAAATTGACCGCTTACATCGAAACAATTCGGGAAAAGAGCTTTAAGTTGGGTAAGTTGTGCAGAGTTAGCGGAAACGCCGTCACGAGAGAAAAGTTCTTCGGAGATCATTTATCCTCCGAATAAATTTTTAAGAAAAGTGATAGATTTTGCTTGCAATTAACGTTTAGTTTAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGCATATTTTTTACTCCTATTACTGGTTGTCAAGTACAAAGTGTACTTTGTTTTATACAATATCGAGTGTTAAAAAGCTGAAACTACGCCGGTCGGAAAAATCAATAAATCTATTGAATGATGATTCCTGCTAGCGTAATTTCAGCTCATTTAATTGTCAGAACTACGCCTCACCCAATAATTTCAATTCGCGATTTCTCACTTGTTTTTTCAGAATGT > 1/1330071‑1330556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |