| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 286401 | 0 (0.000) | 22 (0.280) +TAAACAACCAACTACACGAATA |
8/386 | 4.9 | 32.5% | intergenic (‑19041/+58204) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| ? | 1 | = 286784 | 102 (1.160) | intergenic (‑19424/+57821) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
AATTGGACGCTATCGGCAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTCCAACCGTTCCGCCTACAAAACCA > 1/286156‑286424 | aaTTGGACGCTATCGGCAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaac < 1:318086/251‑6 (MQ=255)aaTTGGACGCTATCGGCAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaac < 1:42663/251‑6 (MQ=255) tCGGCAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaacaaccaactacac < 1:403795/251‑18 (MQ=255) cAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaacaaccaactacccgaa < 1:634820/250‑21 (MQ=255) cAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaacaaccaactacacgaa < 1:388356/250‑21 (MQ=255) gATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaacaaccaactacacgaata > 1:15630/1‑228 (MQ=255) gATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaacaaccaactacacgaata > 1:581982/1‑228 (MQ=255) aTTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaacaaccaactacacgaatac > 1:722735/1‑227 (MQ=255) aTTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaac < 1:179222/232‑6 (MQ=255) gTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTctaaac < 1:831171/220‑6 (MQ=255) | AATTGGACGCTATCGGCAGATTAGAAGAACAGTTAGCGACGCTGGAGCAGCAAACAACCCAACAAGCCCTTGTCAATCGAACTTATCGTTATAACGAGGTGGGCAACCTAATACAAAGCCGTGATTTACGCATGGGCAATCAGGATTACTATTACGACAAACTCGGTCAACTGACCATGACCGGCAATGAAGTCTTCGCCTTTGACCCGGCGCATAACCTGATTGAGCGGGAAAGCGAGAAACGTCCAACCGTTCCGCCTACAAAACCA > 1/286156‑286424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |