| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1137513 | NA (NA) | 14 (0.160) +C |
10/428 | 4.7 | 17.8% | intergenic (+464/‑21991) | unknown/unknown | LSU rRNA ## 23S rRNA, large subunit ribosomal RNA/tRNA‑Val‑GAC |
| ? | 1 | = 1715996 | 65 (0.740) | intergenic (‑46048/‑3887) | unknown/unknown | tRNA‑Arg‑CCG/tRNA‑Asn‑GTT | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1137281‑1137513‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACAT < 1/1715996‑1715950 | GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGT > 1:349581/1‑251GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGT > 1:41092/1‑251GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCG < 1:19711/250‑1GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCG < 1:495300/250‑1 CGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGTTAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAA < 1:773199/250‑1 AAAGCGCGGAAAGGAGAGAGTATAGTCATCAAAGAAGATTGGCGGTGATAGGGCGGTGGTACCTCCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAG < 1:579189/250‑1 GAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCGCCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAG < 1:5275/250‑1 GAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAG < 1:519975/250‑1 GGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGT > 1:866998/1‑250 ATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCTGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGCCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAG > 1:636028/1‑215 GTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCG > 1:822789/1‑210 CCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACAT > 1:504806/1‑204 GCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCG < 1:173328/142‑1 GCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAACAACCGTACGCTATGCGTATG < 1:707938/138‑1 | GAATAAGAAAGCGAAAGCGCGGAAAGGAGAGAGGATAGTCATCAAAGAATATTGGCGGCGATAGTGCGGTGGTACCACCTGAAACCATACCGAACTCAGAAGTGAAAGGCCGTAATGCCGATGGTAGTGTGGGGCATCCCCATGTGAGAGTAGGTCACCGCCAAGCCTGATAGGGAGCCCTGATGTGAGAGCATCGGGGCTTTTTGTTATAGCTAGACGTTGTCTAGCTATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1137281‑1137513‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACAT < 1/1715996‑1715950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |