New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	519634 =	139 (1.580)	11 (0.220) +TAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAG	8/246	3.2	14.4%	intergenic (+22081/‑179709)	unknown/unknown	tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
	?	1	1029309 =	90 (1.020)					intergenic (‑22853/‑5910)	unknown/unknown	tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTCACCTAGCAGGATTTTGGTATCCGTGAGGTGGCTGAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGTGGTTAAAGCCTTTCGTGAAAGAAGGCTTGATGGCGTAAAATCACCTTACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/519760‑519634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAGGTTTCGTCGCACTAAAATCC  >  1/1029309‑1029437                                                                                                                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                  GGTCACCGAACAGGA‑TTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGAT                                                                                                 >  1:890302/1‑251  GTCACCGAACAGGA‑TTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGA                                                                                                  <  1:286245/249‑1   tcaccgaaCAGGA‑TTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATC                                                                                                <  1:538561/242‑1   gtcaccgaacgggaTTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGA                                                                                                  <  1:595111/235‑1         aaCAGGA‑TTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAAT                                                                                          <  1:16045/248‑1               gaTTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTG                                                                                        <  1:743829/245‑1                       ATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGA                                                                            >  1:50436/1‑251                        TCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTG‑ATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAG                                                                           >  1:708426/1‑251                                                                                                    gaCTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAaacgcaagcattcttcttcag  <  1:247990/247‑22                                                                                                     aCTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGC                                                                                                                        >  1:15044/2‑130                                                                                                             GCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAA                                                                                           >  1:193267/1‑151                                                                                                                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                  GGTCACCTAGCAGGATTTTGGTATCCGTGAGGTGGCTGAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGTGGTTAAAGCCTTTCGTGAAAGAAGGCTTGATGGCGTAAAATCACCTTACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  1/519760‑519634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAGGTTTCGTCGCACTAAAATCC  >  1/1029309‑1029437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.