| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 497805 = | NA (NA) | 24 (0.290) +TGTCC |
15/408 | 3.4 | 60.6% | intergenic (+252/‑201538) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| ? | 1 | = 593468 | 16 (0.190) | intergenic (+95915/‑105875) | unknown/unknown | tRNA‑SeC(p)‑TCA/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTTTTTCATCTTTGGCTTCACTATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGATAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/498038‑497805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGTTTTGGGGTGCAGAGCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCCCTCCATTTTGGCAACCTGTTCCGGTG < 1/593468‑593349 ||||| CTTTTTCATCTTTGGCTTCACTATTTTAGGGCGTTGAGGGTTTATATAAGGGGATTTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGG < 1:744744/251‑1 ATCTTTGGCTTCACTATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGAtc < 1:342208/251‑3 TCTTTGGCTTCACTATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTC < 1:629087/230‑1 CTATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTG < 1:516002/244‑1 CTATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGG < 1:508810/230‑1 ATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAA > 1:185103/1‑251 ATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAA > 1:828780/1‑251 GGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTG > 1:9422/1‑227 GGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAG > 1:427356/1‑251 GGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAG > 1:254574/1‑251 GGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGT > 1:829796/1‑225 GGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGC > 1:411520/1‑215 ATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGC < 1:503364/222‑1 ATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGA < 1:26391/251‑1 ATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGG < 1:783098/187‑1 ATTAAGCCCTCTTGCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACTGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTTGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTG < 1:190524/201‑1 GCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAG < 1:571814/194‑1 TTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGT > 1:580042/1‑251 AAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCC < 1:858432/251‑1 GGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCC > 1:130955/1‑249 GGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTG < 1:68607/243‑1 TCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCCCTCCATTT > 1:56730/1‑251 ATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCCCTCCATTTTGGC < 1:341581/251‑1 AACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCCCTCCATTTTGGCAACCTGTTCCGGTG < 1:215795/251‑1 AACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGGTAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCGTGTCCAGGTTTTGGGGTGCAGATCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCCTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCCCTCCATTTTGGCAACCTGTTCCGGTG < 1:275174/251‑1 ||||| CTTTTTCATCTTTGGCTTCACTATTTTAGGGCGTTGAGGGTTTATATAAGGGGA‑TTTTACGCCATTAAGCCCTCTTTCACGAAAGGCTTTTCCAATAAATGACTTGAGAACGAGAAATCTGATGAAGTTTCGCCACCTCACGGATACCAAAATCCTGCTCGGTGACCTGTTTGATAGTTTTTAAACGAAATTGATAAGAGTAAGACATAATCTGCACCTCAAATTAGGTGTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/498038‑497805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGTTTTGGGGTGCAGAGCAAAGTGCGGTCGGAAAATGCAGCGTTTTTAGCCTTTTGCCAAAATCTCTTTGAGGAAGCGGGCGGTGTGCGAGCCCTCCATTTTGGCAACCTGTTCCGGTG < 1/593468‑593349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |